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Information for unigene UN12855
| FASTA Sequence |
| Unigene ID: UN12855 | Length: 1488 |
SSR | | GGAAGTTTTCGTTAGCTCTTCTTCAGACCATGACGGACAAACACCAAAACGACCACATGGACGAAGAAGGAGACGATTTCAAAACC
CCACTACCTCTCGAGAAGAAGAAGAAAAGAAAGAAGACCACTACGACGAAGAAGACAACAACAACAACAATCGAAACAGGATCAAT
CGACATCACCTCCGTCAAAACAATCTCCGAGAAACCCGACAGAATCTCTCCGATCGTTGCCTACTTCGCCTCGGGGTACGATCCTT
CTTCGAAATCTAAAGAAGCTCCGCCGAAGGTTACGGTTTACAAGAACGCGTCGAAGAAGAGGACGGAGGTTGTTGTGAGCCCGCCC
GGGTCGAACGTGGAGTTCGTGGGTTCGAGTCACGCCGGAGGGCAAGTCGCTAGGCAGACTTGTGTATACACGTTGGGTGTTTTGGA
TAAAGAGACTCAGACCCTCAGGATTCTCCCCATTGCTCACCAGAAGGTGTTGAGATTAGAGACGAGAGTTAAAGCTAAAGAGACAG
TTGATTCAGAAGGGGGGGAGGGTGCCTCGAACACGGAGGCTGGTGAAGAAGAAGAAGCTGACCCTAGACGCCGCACTTTCTGGACC
AAGAGAGCTATTTTAGATGATAAGAAGAGGAGTGCTAGAGTTCTAAGAGACGATGACCCCGAGCACAGAAGACGCTTGAAAATAAA
CTTGACAAATTGGATGTCAACATTAGTGCTCTCGAAGGTGCCAATGCTATTGTTGCACGCAACATTCCTCCTCACAACGCCTCCGC
CACGAATCCGAGAGACGCTTATCCTATAGAACAGATTATCGAAAAGGGAGAGTGGGGCTCCCTTCAGGATGTTTACCGGCTTCTTC
AACAAGAAGCTGGAGCAGCGGCAGCGACCGAGGCTTACCCTGCTTTTGTCCGTAACCGGTTGTTCAGGTTGCGTGACAACAAGGAT
GAGACTGAGAAGGAGACGGTTGCTGGTATCTTGACGTTGCTAACGCATTTGATAAAGTTCAAGGACGTGAACTCGATGGTGGGTGT
TGATTCGGCTAGGAAGCACCATTTTCCGGGGATGATCCGTGATAAATGTAATAGGTTGTTCAAGGATTCTGACACGGGCGGCAGGA
GGATACCTGATGACAAGGTCAACCTTTTGATAAGCTACGTTCTCGTGCTCAGCCTTCACGTGGATAAGTTCAAGACCGACTTTGAA
GACATTGCAAAGGATCTGAGGATGAGCTCGATGGATGTGAGGAGGCATTTTGAGAACCTTGGGTGTAAATTCTCGGTTGAGAACTC
GATTCGTTTTGCGACGTTGCCGGTTCCTCTCCAGTTCCCGCAGATAACGCGGAGGAGGAAGAGACAACGATAGATGGAGAGAGAGA
AGAGTTGTGCTGTTTGCCCGTTTTTTTGATGTGGAGGATGTGATTTTAAGTTATGTTTCTTATGTTTTAATGACTTTGGTCGTACT
GATAAGTGTTTAACCATTGCCTACCG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002884998 DNA binding protein [Arabidopsis lyrata subsp. lyrata] | 732 | 6e-075 |
| NP_188010 DNA binding / DNA-directed RNA polymerase [Arabidopsis thaliana] | 726 | 3e-074 |
| XP_002521367 DNA-directed RNA polymerase I 49 kDa polypeptide, putative [Ricinus communis] | 627 | 9e-063 |
| XP_002278228 PREDICTED: hypothetical protein [Vitis vinifera] | 548 | 1e-053 |
| CBI35920 unnamed protein product [Vitis vinifera] | 548 | 1e-053 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LVK6 Genomic DNA, chromosome 3, P1 clone: MDC16 | 726 | 2e-074 |
| B9S5U8 DNA-directed RNA polymerase I 49 kDa polypeptide, putative | 627 | 6e-063 |
| B9N1A8 Predicted protein | 533 | 5e-052 |
| A2Q1X0 Putative uncharacterized protein (Fragment) | 524 | 5e-051 |
| B7FK61 Putative uncharacterized protein | 517 | 3e-050 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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