Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN12893

FASTA Sequence
Unigene ID: UN12893Length: 1255 SSR 
GACTTCTCGTCAAGAACAGGGTGTATTACATAACGCATGCTCTGTAATCAAACATTTGCCTGAGCACATGACAGCATCTCCTTTAC
CTACTAAGTCACTCTTGTCACCTGAGACAAACAAGACGGTAAAGAAGGATGAGCCTGTGTTACCAAAGTCCTTGGAATACATATCT
TGCCTGATTCATTTGGCTGTTTTTGGGATTCTTGGGGCTATTACGAGATACTTGATGCAGAAACTTTTTGGACCAAGTGTTGCTAG
AGTAACCAGCGATGGGAGCATCTTGTACCTTGATCTTCCCTCCAATATGGTGGGATCATTCTTGGTGGGTTGGTTTGGGGTCGTGT
TCAAAGCAGATATAACCAGAGTTTCTGAGTTCTTAGCCATAGGATTATCAACTGGCTACTTGGGAAGCCTCACAACATTCAGCGGT
TGGAACCAGAAGATGCTGGATCTTAGTGTTGATGGCAAATGGCTATACGCTGTGCTTGGCTTCCTGTTAGGATTGTTTCTTGCATC
ATACTCCATCATTCTTGGGATTGAAACAGCCAAAGGGTTCAGATGGCTTCTTCAGAGAAGAGCTTCTTCTTCTTCTTCTAAGGAGG
AAAGAAACTCTTGTCTTGAAGTTGACACCTTCAAGAGCCATATCGTGTCTATGACCTTAATGGTTGTGTTGCTTGTGGCTTTACTC
GCATTGAGTGCCACCCAGCTTGTAAAAGAGTTTGACAAAGGCACAAGCGAGGCTCAGCTTTGGTTAGGCTGCTTAGTTGCAGCCCC
TGGTGTCTGGCTCAGATGGTTTCTTGCTCGGCTCAACGGACGTGGGCTAGGGAAAGATGGACAGTATTTGAGGTGGGTCCCGTTAG
GCACCGTTATTGCGAATGTTGTTGCAGCTTCTGCCATGGCAGCTTTGGCCACATTAAAGAAATCGGTGGACACTACAACATGTAAC
ACGGTTGCTTCTAGTATACAGTTTGGTCTGTTGGGGTGTTTAAGCACAGTTTCAACCCTAATGGCTGAGTTCAATGCCATGAGAGA
AAGTGACTATCCATGGAGAGCATATGCGTATGTATCTTTCACTATCGCAGCTTCTTTTGCCATTGGAATTGTTATATACCCTGTCC
CTATTTGGGTAGTAGGATTCAGTTAGTTAATATTCAAACTAGATGACTCTTGTAAAGCAAAAGAGTTTGGTGACAAATCAAGTTAC
CCCTGTGCACAAAGTTTTAAGACTAAACGTGTATACTTATTATAATGATAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002879949 camphor resistance CrcB family protein [Arabidopsis lyrata subsp. lyrata]16081e-176
NP_565956 camphor resistance CrcB-like protein [Arabidopsis thaliana]15954e-175
XP_002513771 conserved hypothetical protein [Ricinus communis]11743e-126
XP_002284405 PREDICTED: hypothetical protein [Vitis vinifera]11402e-122
CBI19060 unnamed protein product [Vitis vinifera]11375e-122

Swiss-Prot top hits (Blast detail)Scoree value
Q39R93 Protein crcB homolog1515e-009
B9M837 Protein crcB homolog1372e-007
A5GAD3 Protein crcB homolog1311e-006
A4Y6Z6 Protein crcB homolog1301e-006
A1RJJ3 Protein crcB homolog1301e-006

TrEMBL top hits (Blast detail)Scoree value
Q8RYE2 Expressed protein15953e-175
B9RJ52 Putative uncharacterized protein11742e-126
B9H7C1 Predicted protein10782e-115
B9GUE1 Predicted protein10755e-115
B9RJ54 Putative uncharacterized protein9072e-095

Arabidopsis top hits (Blast detail)Scoree value
AT2G41705.1 camphor resistance CrcB family protein15961e-177
AT2G41705.2 camphor resistance CrcB family protein15961e-177

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information