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Information for unigene UN12914

FASTA Sequence
Unigene ID: UN12914Length: 1874 SSR 
GGACATTCATCACCCACCCCTTTGTTCGAATCTCGACGGCGGAAACAAAGTGGAAGCTTTTATATCTAAACCCTATCTCCGGCGAA
ACAGATGACCGACTTCGAAGATCACGCGGGAAACGGCGCGGCTGTTGATGGCGGCGAAATAGAGGATCAATTAGACTGGAAATCTC
AGGAAGAAAGGCGTGACAATGAAAGGGAGTGTTCGAGAAGTAAAGATAGAGAAAGAGAGAAGAGTGGTGATAAGGACTCCGATCGT
CGAAGCAGAGACAGAGATGTTGATCGCAAAAGCAAGGAGAGGAGTAGAGACAGAGATGGTGGTCATCACCGAAGTAGTCGTCACAG
GGATCGTAGCAGGGACCGTAGTGATAGAAGAGATGATGATGATGATGACCACCGTAGAAGCCGTGACCGTGACTATGATAGGCGTA
GAGATGATAGACGTCGCCGTAGGTCTCGTTCTCGTTCCAAGGATAGATCTCGTCACCGCAGATCTCGATCTCCATCAAAACCTAAG
CGGGTGAGTGGATTCGACATGGCACCTCCAGCCTCTGCTATGTTAGCTGCTGGTGCTGCTACTCCTGTTACAGCCCAAGTTCCTCC
CGCACCACCAACTATTGGAGTGTTTCCCAACATAATGTCCTTACCAACTGGACAGGCGTTTGGGGGACTCCCTATGATGCCAATCC
AGGCTATGACACAGCAGGCGACTAGGCATGCTCGCAGAGTCTATGTTGGTGGCCTTTCCCCTCAAGCAAATGAACAGTCAGTGGCT
ACTTTTTTTAGTCAAGTTATGGCTGCTGTGGGCGGAAACACTGCTGGTCCAGGTGATGCTGTTGTTAATGTTTACATCAACCATGA
GAAGAAGTTTGCTTTTGTGGAGATGCGTTCTGTTGAAGAGGCTAGCAACGCAATGTCTTTGGATGGGATTATCTTCGAGGGAGCTC
CAGTGAAGGTGAGAAGGCCTAGTGACTATAACCCATCTCTAGCTGCATCACTTGGTCCAAGCCATCCCAGTCCCCATCTAAACTTA
GCTGCTGTTGGTCTGACTCCAGGTGCTTCCGGTGGGCTCGAGGGTCCAGACCGTATTTTCGTCGGCGGGCTTCCGTACTACTTCAC
CGAGTTGCAAGTCAGGGAGCTGCTTGAGAGCTTTGGAGCCCTTAAGGGCTTTGATCTCGTGAAAGACAGAGAGACTGGCAACTCTA
AAGGATACGCTTTCTGTGTCTACCAAGAAGTCGCCGTTACAGATATTGCGTGCGCTGCCCTAAACGGCATCAAAATGGGAGATAAG
ACACTTACCGTGAGACGTGCCAACCTGGGAGCAATGCAGCCGAAACCTGAACAAGAGAGTGTATTGATGCATGCACAACAGCAGAT
TGCTTTTCAGGTGAATATGTTACAGCCAGGCCCCGTGGCAACAATGGTTGTGTGTTTGACTCAAGTTGTTAATGAGGATGAGCTTA
GAGACGACGAGGAGTTTGAAGATATCATGGAAGACGTGAGACAAGAAGGCGGAAAGTTTGGTGCTTTGACCAGCGTTGTGATTCCG
CGTCCCAGCCCCGGCGGTGAGCCAGTTGCAGGCCTTGGCAAGGTGTTCTTGAAGTATGGTGATACGGATGGATCGTCAAGGGCAAG
AAGCGGGATGAATGGTAGAAGGTTTGGAGGTAACGAAGTGGTTGCTGTGTTTTACCCTGAAGACAAGTTTGATCAGGGAGACTACG
GAGCCTGAGAGCTCATTGTCCCTTTTGTTTCTTTGCTTTTCAAGACCTTGTAAAAGTTTTCTTTTTTTTTTGCTTCAGTTAAGGGT
AAGGGGACCCTTTTGCATGTGATTTTAAGACCAAGAGATGACTTTAATAAATTTTATTTAACTGACAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002866997 hypothetical protein ARALYDRAFT_490965 [Arabidopsis lyrata subsp. lyrata]22642e-252
NP_001190937 Splicing factor U2af large subunit A [Arabidopsis thaliana]21612e-240
NP_195387 Splicing factor U2af large subunit A [Arabidopsis thaliana]20974e-233
XP_002271463 PREDICTED: hypothetical protein [Vitis vinifera]19684e-218
CAN68321 hypothetical protein VITISV_032193 [Vitis vinifera]19675e-218

Swiss-Prot top hits (Blast detail)Scoree value
O23212 Splicing factor U2af large subunit A20972e-234
Q9ZR39 Splicing factor U2af large subunit A18704e-208
Q9ZR40 Splicing factor U2af large subunit B18704e-208
Q8L716 Splicing factor U2af large subunit B18122e-201
Q2QZL4 Splicing factor U2af large subunit B17988e-200

TrEMBL top hits (Blast detail)Scoree value
A5BUJ8 Putative uncharacterized protein19673e-218
A9XLE6 Putative uncharacterized protein19172e-212
A9XLD1 Putative uncharacterized protein18851e-208
C0IXK1 U2 snRNP auxiliary factor large subunit18851e-208
A9XLG6 Putative uncharacterized protein18804e-208

Arabidopsis top hits (Blast detail)Scoree value
AT4G36690.1 ATU2AF65A; RNA binding / nucleic acid binding / nucleotide binding22952e-258
AT4G36690.2 ATU2AF65A; RNA binding / nucleic acid binding / nucleotide binding19752e-221
AT4G36690.3 ATU2AF65A; RNA binding / nucleic acid binding / nucleotide binding19691e-220
AT1G60900.1 U2 snRNP auxiliary factor large subunit, putative18122e-202
AT1G60830.1 U2 snRNP auxiliary factor large subunit, putative4232e-041

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  40%
 
182  40%
 
211  20%

Unigene MembersMember information