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Information for unigene UN12958

FASTA Sequence
Unigene ID: UN12958Length: 914 SSR 
GCAAAAGACATCAAAATTTCAAAAGGACTAATCCTTAGTATGCACATGTACAAAAAAGTGATTTTGCCTCCAAGCTACAAAGAAGA
AGAAGAAGAACAGAGGTATACAAAGAAAACTGCAAATGATCACCATGAAAGCTAGAAGAAGGGGAATAACAGGTACTCTGCATAGA
AGAGATTCCATATAAATCGGTAATATCCTGCAATAGCTTCCTTTGTGTAGTTTGCTTTTTCTAGCACCCATGTCTGGAAAATCAAG
CATGAAGCCAAGATCATATGTGCAGGAATCATCAAGCTACCTCTAAAAACCTGAGGCATGTAGAAAGCTAGTGATACAGCAGAAAT
ATAGTTAACTAGCAGAAGTCCGGAACCGAGGAATGCAATGTTCCTCACTCCAAGCTTTGTTGCTAGAGTTGATATTTGGAACTTGC
GATCTCCTTCAACATCAGGAAGATCTTTTGTGATAGCAATGACCAGTGCAAACAATGTCACAAATGACGTTATGAAAGCCACAGGT
GCACTCCACTGAAACGAAAGTCCAAGGGCAGCTCTAGTAGCATGGTACACACCAAAATTAAGAAGGAAACCTCGTACCGTGGCAAT
AATAAGAAACGCTGCAACTGGAAACGCGCGATTCTATCAAGAACTGGATCGGAACCAGCAGCACCTACCTGAGAACATGCCCTGAT
CGAGATTTTTCTGTAGTTAGTTGAAACAAATTTGGACCGCATACATGAACTTGATAAGCTCGTGAAGCCAACATCTTGGGACCGGC
TTAGAAGCTTCCCAGCTAAATGCACAGAAGGCCGATGGTGATGATGAGAAGCTGCTAAGAAACGAGGTGATACAGACGAGAACCGA
AGAGAAGGTGGTTGAGAGATTGAGAGCTCCATTGATGCCACTAGCCACACACCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884874 prenyltransferase [Arabidopsis lyrata subsp. lyrata]8067e-084
NP_001078138 homogentisate solanesyltransferase [Arabidopsis thaliana]7942e-082
NP_001154609 homogentisate solanesyltransferase [Arabidopsis thaliana]7942e-082
XP_002308343 predicted protein [Populus trichocarpa]7063e-072
XP_002460913 hypothetical protein SORBIDRAFT_02g037370 [Sorghum bicolor]6955e-071

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q1ACB3 Homogentisate phytyltransferase VTE2-27941e-082
B9H9X9 Predicted protein7062e-072
C5XCE4 Putative uncharacterized protein Sb02g0373706954e-071
B6T6U8 Prenyltransferase/ zinc ion binding protein6855e-070
B8A333 Putative uncharacterized protein6821e-069

Arabidopsis top hits (Blast detail)Scoree value
AT3G11945.1 homogentisate farnesyltransferase/ homogentisate geranylgeranyltransferase/ homogentisate solanesyltransferase7956e-085
AT3G11945.2 homogentisate farnesyltransferase/ homogentisate geranylgeranyltransferase/ homogentisate solanesyltransferase7956e-085
AT2G18950.1 HPT1 (HOMOGENTISATE PHYTYLTRANSFERASE 1); homogentisate phytyltransferase/ prenyltransferase2355e-020

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
63  100%

Unigene MembersMember information