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Information for unigene UN12967

FASTA Sequence
Unigene ID: UN12967Length: 836 SSR 
CATATTTAAAATTTTCTATTTTTATATGATTTCATTCCCACATCATCCAGATAATACACTCTCTCATTGTTTCAACAATTAATATT
TCAGCAAAATAAATCAAGTACAGCCCCTTTTAGACAATTAATTCAAACACACAAACAAAACAAAACATTACAAAAATAAAGAAAAT
TGAACTGATTGGACATTTCTAACTTAAATGATTTCCCTGAAAAAGAATTTTAGGTTTTTGTTTTTGCAATTTGGATGTGATCCAAA
AAAACTGTGAGATTGGTCACTTACCACATCCTTAACAGGGCAAACGGAATCATGAACTGAGCGAGACCTGTGACCACGGAGACTGA
TCCAATGTTCTTGACAGGTGCAGATTTTGGTGGAGGAGGGAGCTTCTCTACTTTAACAGCGAGCTTCATGCCTCCGTAACATCCAC
CCTTTCCGTCGAGCAGATAGTAGTGCTTGGTCACGTTGAGAGGGACAACGTCTCTCCCTGCTCCACGTGTCCAGTTTACGAGAGGA
TGGTCGGAATTGCAGTTTTCGTAGTCGGTTTTGTTTACTTCGAGAATGTTGTGTTGGTTTCTGTCGAACACGAAATAGAGCCAGTC
ACCGAGGTAGAAATGCTTTCCCTGAGCCCAGATGGTGTAGTTGATGTTTGGGTTCCAGAACTTGTTGTCACCGACGGTATACTTCT
TCGCGGTCACTCCCGGCACTGGCATCACCACTACATAAGCCAGTACCACCGCAGCAATCAGCACCGTCAATCTCGCCATTTTTCTC
TCTCTCTATTGACACTCTCTCTCTCTCTCTCTCTCTCTAGACTTGTGGGTTTAGTTGCGCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_197039 Lamin-like protein [Arabidopsis thaliana]7672e-079
AAN60271 unknown [Arabidopsis thaliana]7592e-078
XP_002873721 hypothetical protein ARALYDRAFT_909508 [Arabidopsis lyrata subsp. lyrata]7547e-078
ABL97976 lamin [Brassica rapa]7521e-077
CAA65749 lamin [Brassica oleracea]6283e-063

Swiss-Prot top hits (Blast detail)Scoree value
Q39131 Lamin-like protein7679e-081
Q41001 Blue copper protein1772e-012
Q8LG89 Basic blue protein1602e-010
Q9T076 Early nodulin-like protein 21451e-008

TrEMBL top hits (Blast detail)Scoree value
A1YMX0 Lamin7528e-078
Q39370 Lamin6282e-063
C6SVN5 Putative uncharacterized protein5555e-055
Q8L9G8 Putative lamin5394e-053
Q9MAC1 At3g010705394e-053

Arabidopsis top hits (Blast detail)Scoree value
AT5G15350.1 plastocyanin-like domain-containing protein7679e-082
AT3G01070.1 plastocyanin-like domain-containing protein5438e-056
AT4G12880.1 plastocyanin-like domain-containing protein5374e-055
AT2G27035.1 plastocyanin-like domain-containing protein2857e-026
AT3G60270.1 uclacyanin, putative1826e-014

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
63  75%
 
91  25%

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