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Information for unigene UN12973
| FASTA Sequence |
| Unigene ID: UN12973 | Length: 1293 |
SSR | | GAAAAACAAAAATGAAAAAAGAAAGAGAGAGAATATGTACCCGATTGGTTAAGAAGAAACAGAAACTCTGAAGAAACCCTAAAGGA
AGAAGAAGTAGTCTCCCTCTCTCTCTCTCGATCTCTCTCCTCTCTCTTTCTCCCATCACTTTGCTCAATCAAATTTGCGCGGGAAA
TCGGACCAACCACTTTCTCCCGTTTTCCTTGCTTCTGGAGATACAGCTCTTTTAGCTAGATTGATTTTCTCCACGAGATCTGGGGC
TTGTCTTACGTGATACATATCAGAGTGATCATGCAAAAGCAATTCAGAGCTGCGCTATAAAGAAGAAGATGGAGCCTGAACGTCTC
CAATTTGGAGGTCCGAGAGAGTTGTGCGGTGCCGTGGATCTTGATTTCTCAGTACAAACTACTGCAACACCATGAGTTCTTTTGCA
AAAGGTCGCTTTCCGCGTCTCTATCGGATTCCCACTATCTTCACGACGTGGTTGGAGACGCTGAGATTAGAAAAGGAGAAGGGATG
CAGTTAGACCAGCTTGTTCAGAATAATAATACGTCACAGATCCGGGAGAGTAATACCCGCATCCAGCCTTTTGATGTGGATGAGCT
TAAGGAGGCTTTCCAGCTAAATGATATGACTCCTGTTGAATTGCCTCTAGCAGAGAAGGGAGCTCCTACAATTCCACCAAAGTCAA
AACGTGGGTCGAAAGATAAGGATAGGAAACATAAAAAGCACGAGGACAGAGAGAAGGACATAGATAGAGAGCATAAGAAGCACAAG
CACAGGCATAAAGACCGAAGCAAAGATAAAGACAAGGACCGAGACAGAAAAAAGGAAAAAAATGGCCACCATGATTCGGGTGATCA
CTTTAAGAAACATCATGATAAGAAAAGGAAACATGATGGGGATGAAGATCTAAATGACGTTCATAGGCACAAGAAAAACAAGCATA
GGAGCTCAAAGCTTGATGAGATGGGTGCTGTAAGGGTTGGTGGCTAAAATTGGTAGACATTCCCAGTTTCGTATTCTGGAATCCTG
TAGGTGTCATGGAAGAGGTTTAGAAGCACTTTTCAACTCACTGTAGACTACATATTAGGTTAAAAAAATTCAAAATGGTGAATTCA
TTCGTTGAAGGTGTTGAAGAAGAAGCAGAACTTGTATTACATTTGATTTGGTGGCAGCTTTGTAACATTTTGATCTTTGGAGTGTT
TTATTCCATCTCTTTGTCTGTCTATAAAATCACAATACTACTGAGTACTCTCAATGTTTACTATTCATGTAAAAATAATTAGTTAT
GCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002873556 hypothetical protein ARALYDRAFT_488066 [Arabidopsis lyrata subsp. lyrata] | 916 | 2e-096 |
| NP_196784 uncharacterized protein [Arabidopsis thaliana] | 903 | 7e-095 |
| AAR20782 At5g12230 [Arabidopsis thaliana] | 903 | 7e-095 |
| XP_002532456 RNA binding protein, putative [Ricinus communis] | 809 | 6e-084 |
| XP_002312859 predicted protein [Populus trichocarpa] | 779 | 2e-080 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q2QZL4 Splicing factor U2af large subunit B | 181 | 2e-012 |
| Q2QKB4 Splicing factor U2af large subunit B | 153 | 3e-009 |
| Q6PGZ3 TRAF3-interacting protein 1 | 148 | 1e-008 |
| Q8WXA9 Splicing factor, arginine/serine-rich 12 | 147 | 1e-008 |
| Q8L716 Splicing factor U2af large subunit B | 147 | 1e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q6NMK7 At5g12230 | 903 | 5e-095 |
| Q9FMP0 Genomic DNA, chromosome 5, P1 clone:MXC9 | 903 | 5e-095 |
| B9T2I7 RNA binding protein, putative | 809 | 4e-084 |
| B9HQF9 Predicted protein | 779 | 1e-080 |
| B9MYQ1 Predicted protein | 775 | 3e-080 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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