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Information for unigene UN12978
| FASTA Sequence |
| Unigene ID: UN12978 | Length: 1457 |
SSR | | GTGAATCTTTCAAATTTAATAAACGAATTCAGCACTCAGTGATTACAACATTGAGCACATGACTGTGTTCGATCCAAGCAAATTAA
ACTTCAATCGGACCAAAAACTTTGAATGAACAGGATCCTCTAAACCAGCTAGAAGGTCCAACTCACCAGAAAACATTCTCAAAGAA
ACAAAAACGTTAAACTTCTACATCAACACACCAGAATATTCATTGCAGATGAATGGTACCATCAAGAGTGATCAGGCTTTGTGGTC
ACGGTAATGAACAATGGCTTCAGGTTTAAGACGACCTGTGCAGATTTGGTGAACCGTTGAAAACAGCGGAAACATCTCCATCCATC
CACAGTGGTTCAAGACCTCGTAAACCTCTCTTGCCGTGGAAACACCCTGTAGCTTTTGCCCTTGTAGCATCTCTGCTTCAAGCTCA
TCAAAAGACCTTTTTCCTCCACTTTGGGCAAATGCTTCTGCTACTCTTCTGTTTCTTCCTCCTAAGCAAGTTGTTATGACATCTGC
TACACCACAGCTCTCGAAGAAAGTACTGTCTTTAACAGATGGAAACAGAAGCTTCGAGAGTGCTCTCATCTCTCTTAAACCAATCC
TCATGATTGCAGCCTTTGTGTTATTACCCATATCCAAACCATCAACGAAACCAGCTGCAATAGCCACAACATTCTTCAAGGTCCCA
CACAACTCTACTCCTTCAACATCATGAACCGGTGTGACCATAAAATAGGGAGTACTAAACAACTGAACCCAAGTGTCAGCTATTTC
TTTACTCTCTCTGTATCCAACCGTTGCTTCGCTAAACTTCTCCACAGCAATCTCGTTGGCGATGTTAGCGCCCATAAGAACACAAC
AGTTGATACCAAGTTCCTTGGAGATGAGAGTAGAGATCATGCAGGGACCTTCCTTCTTGACTTCCATCCCTTTAACAAGAGATATA
GCCTCAACCTCTCCTGTTACCTTTCCCTTAAGCTTCTTGCATATACCACCCATGAATTGATGCGGTGTAACAAAAACCAACATGTT
TGCTTCCTTCACTGCGTTTTCAAGGTCAGGATCTGCAACAACATTTCTTCCTAACTTGATTCCAGGGAGATACTTGACATTTTCAT
TGGTTTTGTTGATTACATCAGTGAGCTTCTCACCATTTGGGAGAACTTCCTCAAACACCCACATCCTAACTTCATCATGGAAAGAA
GGAGGCTTGAGGGCATTAGAAGCGATGAGCTTAGCAGCAACGCTTCCCCAATTGCCACTGCCCACGACCGTAACCCCGATTTGAGA
GGACACGTACGTTACAGAGAGAGAGAGAGAGAAGGGTACGTGTAGTAACTGTTATGCCTTCTTCATTGCTATAAGCCGCCATGTTT
TGGAATTGAATGGTTGGATCTTTGGCGATCTCCTCTATGTTCCCATCTTCTTCCTCTCTCTCTTTTTTTTTCTTTCAATCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002868644 hypothetical protein ARALYDRAFT_493921 [Arabidopsis lyrata subsp. lyrata] | 1691 | 3e-186 |
| NP_198877 glycerol-3-phosphate dehydrogenase [NAD+] [Arabidopsis thaliana] | 1675 | 3e-184 |
| AAL87336 putative dihydroxyacetone 3-phosphate reductase dhaprd [Arabidopsis thaliana] | 1675 | 3e-184 |
| XP_002526956 glycerol-3-phosphate dehydrogenase, putative [Ricinus communis] | 1519 | 3e-166 |
| P52425 RecName: Full=Glycerol-3-phosphate dehydrogenase [NAD+] | 1518 | 4e-166 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SCX9 Glycerol-3-phosphate dehydrogenase [NAD+], chloroplastic | 1675 | 1e-185 |
| P52425 Glycerol-3-phosphate dehydrogenase [NAD+] | 1518 | 2e-167 |
| Q27556 Glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic | 878 | 3e-093 |
| Q27567 Glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic | 877 | 4e-093 |
| P13706 Glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic | 877 | 4e-093 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SLT7 Glycerol-3-phosphate dehydrogenase, putative | 1519 | 2e-166 |
| B9IJL4 Predicted protein | 1504 | 1e-164 |
| A5B7F6 Putative uncharacterized protein | 1498 | 6e-164 |
| B4FZV9 Glycerol-3-phosphate dehydrogenase | 1430 | 4e-156 |
| C5XJD7 Putative uncharacterized protein Sb03g047310 | 1427 | 1e-155 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G40610.1 glycerol-3-phosphate dehydrogenase (NAD+) / GPDH | 1675 | 9e-187 |
| AT2G40690.1 GLY1; glycerol-3-phosphate dehydrogenase (NAD+) | 286 | 1e-025 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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