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Information for unigene UN13008
| FASTA Sequence |
| Unigene ID: UN13008 | Length: 655 |
SSR | | GGGTTTCTTCGAAGTTTCTTCACTGTGCGTCAAAAGATTTTCTCTCAGAGGTTTTCTCGGGGGAAGAAGAAACTGACTACATCTTA
TATAAGATCCTAGAGAGAGAGAGAGAGATCTAAACAGGTTCGTCTCCGATGGGACCGCTTCAGTCATTCCGAAGAGCGTACGGAGC
CTTAAAAGACACCACTAAAGTCGGCCTCGTCCGAGTCAACAGCGATTACGCCGATATAGAGGTTGCCATAGTCAAAGCTACTAACC
ATGTTGAGTGTCCTCCCAAGGATCGGCATCTCAGGAAGATCTTCATAGCAACATCCGCAACTAGGCCTCGAGCGGATGTTGCTTAC
TGCATTCACACTCTCTCTCGTCGATTGCACAAAACCAGAAACTGGACGGTTGCGTTAAAAGCGTTGCTTGTTCTACACCGGCTTGT
AAGGGAGGGAGATCCTACATTTAGAGAAGAACTTTTGAACTTTTCGCGAAAAGGACGCTTCCTGCAGCTTTCTAATTTCAAGGATG
ACTCATCCACAGCGGCATGGGATTGTTCGGTGTGGGTACGCGCTTATGCTTTATTTCTTGAGGAACGGCTTCAGTGCTTCAGAGTT
TTGAAATATGATATTGAGGCTGAACGTCTTCCTAAAGTTTCCCCGGGGCAGAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_172944 putative clathrin assembly protein [Arabidopsis thaliana] | 820 | 9e-086 |
| NP_565267 putative clathrin assembly protein [Arabidopsis thaliana] | 790 | 3e-082 |
| XP_002875082 hypothetical protein ARALYDRAFT_904366 [Arabidopsis lyrata subsp. lyrata] | 790 | 3e-082 |
| XP_002311513 predicted protein [Populus trichocarpa] | 751 | 9e-078 |
| CBI26868 unnamed protein product [Vitis vinifera] | 742 | 1e-076 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
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| P94017 Putative clathrin assembly protein At1g14910 | 820 | 4e-087 |
| Q8LBH2 Putative clathrin assembly protein At2g01600 | 790 | 1e-083 |
| Q9LVD8 Putative clathrin assembly protein At5g57200 | 685 | 2e-071 |
| Q8VYT2 Putative clathrin assembly protein At4g25940 | 651 | 2e-067 |
| Q9LHS0 Putative clathrin assembly protein At5g35200 | 551 | 7e-056 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9HJD6 Predicted protein | 751 | 6e-078 |
| B9HW44 Predicted protein | 740 | 1e-076 |
| B9SP68 Clathrin assembly protein, putative | 738 | 2e-076 |
| B9SP87 Clathrin assembly protein, putative | 708 | 6e-073 |
| B9IN76 Predicted protein | 705 | 1e-072 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G14910.1 epsin N-terminal homology (ENTH) domain-containing protein | 820 | 4e-088 |
| AT2G01600.1 epsin N-terminal homology (ENTH) domain-containing protein | 790 | 1e-084 |
| AT5G57200.1 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related | 685 | 2e-072 |
| AT4G25940.1 epsin N-terminal homology (ENTH) domain-containing protein | 651 | 2e-068 |
| AT5G35200.1 epsin N-terminal homology (ENTH) domain-containing protein | 551 | 7e-057 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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