 |
Information for unigene UN13012
| FASTA Sequence |
| Unigene ID: UN13012 | Length: 1252 |
SSR | | GGGATCGTCTTCAACCCCAAACAAGTGTCAGATTCTTCGTTGCTTTTGATCATTTCTTCTCTCTCTCTCTCTCGCCATTGTCAGAA
GGTTTACTGTGATCGGAATCGAATCTTCTGAATCATGAATTATCTTCGTGGAGCTTTCAAGCCGGCATGTAACATTTCAATCACAT
TCACTGATGGGAAGAGTCGTAAACAGGTTCCGGTTAAGAAAGATAATGGACAAATGGTTATGAACCCACTTTTTCAGAGTCAAGAA
ACTATTGCTGGTAAGGTTTGTATTGAACCGTATCAAGGGAAGAAAGTTGAGCACAATGGTGTTAAAGTTGAGCTTCTTGGTCAAAT
AGAAATGTACTTTGACAGAGGCAACTTCTATGACTTTACTTCCCTAGTTCGGGAGCTTGATGTACCTGGAGAAATATATGAAAAGA
AGACGTACCCTTTTGAATTTTCGACCGTTGAGATGCCATATGAGACATACAATGGCGTGAATGTACGGCTAAGGTATGTCCTGAAA
GTAACAGTTACACGTGGTTATGCTGGAAGCATCGTGGAGTATCAGGACTTTGTGGTGCGCAACTATTCTCCACTACCTCCAATCAA
CAACAGCATCAAGATGGAAGTTGGAATCGAGGACTGCCTGCATATCGAGTTTGAGTACAATAAAAGCAAGTATCACCTGAAAGATG
TTATCCTCGGGAAAGTATACTTTCTTCTGGTGAGAATCAAGATAAAGAATATGGATCTTGAGATCAGACGGAGAGAATCAACCGGA
GCAGGAGCTAATACTCACGTCGAGACAGAAACATTGGCCAAATTTGAGTTGATGGATGGTGCTCCCGTTAGAGGCGAATCGATACC
TGTAAGACTGTTCTTGACACCATACGATCTGACGCCAACGCATAAGAACATAAACAACAAATTCAGTGTTAAGTATTATCTGAATC
TTGTCCTGGTTGACGAAGAGGATCGCCGTTACTTCAAGCAACAAGAAATCACGTTGTACAGGCTCAAGGAGGAGACTTCTTGATGT
TTACAAAGAAAGAAAGAAAGATACAAATGAGAATTTTTCAGAAAATTTGTAAAGCCTTTTTTCTTAAGACTTTTTTTCTGTATGGA
ATTGGTTGGGGACTTGGTGGAGTCATGAAGCTTTTAAGTCATGTAAGTTTGTTCATTTGACCCCTAATGTTGTTTGGATTCATGTA
AGAAAACTAGCAACTCTTTTTTTCATCTATCATCACAATAAGCAATTT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_200165 vacuolar protein sorting 26A [Arabidopsis thaliana] | 1527 | 3e-167 |
| XP_002865977 hypothetical protein ARALYDRAFT_331709 [Arabidopsis lyrata subsp. lyrata] | 1524 | 7e-167 |
| XP_002869547 hypothetical protein ARALYDRAFT_913758 [Arabidopsis lyrata subsp. lyrata] | 1472 | 7e-161 |
| NP_194499 vacuolar protein sorting-associated protein 26 [Arabidopsis thaliana] | 1467 | 3e-160 |
| XP_002274585 PREDICTED: hypothetical protein [Vitis vinifera] | 1436 | 1e-156 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9T091 Vacuolar protein sorting-associated protein 26 | 1467 | 1e-161 |
| Q6TNP8 Vacuolar protein sorting-associated protein 26A | 920 | 3e-098 |
| O75436 Vacuolar protein sorting-associated protein 26A | 918 | 5e-098 |
| Q6AY86 Vacuolar protein sorting-associated protein 26A | 918 | 5e-098 |
| Q0VD53 Vacuolar protein sorting-associated protein 26A | 917 | 7e-098 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FJD0 Vacuolar sorting protein-like | 1527 | 2e-167 |
| A9PCL0 Predicted protein | 1428 | 6e-156 |
| Q3HRZ1 Vacuolar protein sorting-associated protein 26-like protein | 1423 | 2e-155 |
| B9N808 Predicted protein | 1420 | 5e-155 |
| B9RPK9 Vacuolar protein sorting 26, vps26, putative | 1393 | 7e-152 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G53530.1 VPS26A (VACUOLAR PROTEIN SORTING 26A) | 1528 | 9e-170 |
| AT4G27690.1 VPS26B (VACUOLAR PROTEIN SORTING 26B) | 1467 | 1e-162 |
| AT4G27690.2 VPS26B (VACUOLAR PROTEIN SORTING 26B) | 1332 | 5e-147 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
