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Information for unigene UN13028

FASTA Sequence
Unigene ID: UN13028Length: 1364  SNP
AGCGAATAATACAAAATGTACATTGAACTCTAAAGCATATGGCTGTTTCTGCAAACACAGCTCAGAGGTTGTTCTTTTTTTTTTTC
AATTTCTCAAGATGTTATTAATATTACAGACATAAACAGATGTTATCAGAGATTCAATAACAAAAACAAAGCAAGACAAATACACG
CATTTTGATGAGTTTCTTTTCATTAGAACTCTCCTTACTGAGGATTGAACTTGACTGTTTCACGATATATAAGCTCCTTGATGTTC
TCTTCTGACAAAGAAGGTTGTTCGAAATCGAAATTGAACGGCCTCACACACACCGGTTCCTCGTTTATATCGTGCAGCGGCGCCAA
ATAAGGGTGGCACAACGCCTCATCAACTGTGATGCGTCTGCTAGGATCAAAGACGAGCATTTTCTCCAGCAGATCTGCTGCTCCAG
CTGACATGTTTGGGAACCTAGCAGCAAAGTTCTGTCTCGGGTACTGTGGAAGCTGTTTAACGTATCTCCTAGCGTTGTCGCTCCTT
AAGAACCCCAAGCTTGAATCATCAGGTGATCCTATAAGCTCAGTGATAAGCCTAAGCTGATGAACATAATCTTTACCGGGAAACAA
GGGCTCTCTTGTCATTGTTTCACCGAGAATACAACCGACGGACCAAATATCGATGGCTGCGGTGTACTCGGAGCAGTTAAGGAGCA
GCTCTGGAGCACGGTACCAGCGTGTAACAACGTACTCAGTCATGAAGTCAGTCTCGGATTTGGTCCTCGCAAGCCCGAAATCACCA
AGCTTTAGATCACAGTTTGCATTCAGGAGCAAATTGCTGGGCTTTAAATCACGGTGTAACACATTGGCTGAGTGAACATACTTGAG
CCCACGCAGCAACTGATACAAGAAGAACCGGCAATGATCATCAGTTAAGGGTTGGTTAGAGCGTATAATCTGGTGGAGATCAGTGT
CCATAAGCTCATAAACAATGTAAACATCGTTGAAGTTCTCTCTGAGGGGTGGTCTTATTATATCCTTAACAGCAATAACGTTCTCG
TGATCCATGTGCTTGAGGAGCTTGATCTCTCTCAAAGTCCTCTTGGCGTCGATGATGTTGTCAAAAGCGTTACCGATCTTCTTGAT
CGCTACTTCCTCTCCCGTCTCTGAGTTTGTAGCAGCACAGACGATGCCGTAAGCGCCTCTGCCGATGGGACGAAGAGGAGGAACAT
ACTTTCTACTCACTTCGAAGATGTTTCCATAAACATTGTACTGAACGTAGCTACCACCGTGAGTAGCCAATCCTTTCGTGCTCTGA
TCGCCTCCTCCGAAACAGTTCTCCGCCGCCATAGCTAAAATCGAATTGAATCGGACCCAAGACACACGCTCGCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ADP24129 mitogen-activaed protein kinase 4 [Brassica napus]19361e-214
ACE80627 MAP kinase 4 [Brassica napus]19298e-214
ABB69023 mitogen-activated protein kinase 4 [Brassica napus]19271e-213
BAJ33841 unnamed protein product [Thellungiella halophila]19092e-211
XP_002874986 mitogen-activated protein kinase 4 [Arabidopsis lyrata subsp. lyrata]19021e-210

Swiss-Prot top hits (Blast detail)Scoree value
Q39024 Mitogen-activated protein kinase 418935e-211
Q9LMM5 Mitogen-activated protein kinase 1117304e-192
Q40353 Mitogen-activated protein kinase homolog MMK216741e-185
Q5J4W4 Mitogen-activated protein kinase 216552e-183
Q336X9 Mitogen-activated protein kinase 616533e-183

TrEMBL top hits (Blast detail)Scoree value
C1IHR2 MAP kinase 419296e-214
Q2XVV7 Mitogen-activated protein kinase 419279e-214
B2BDY3 Mitogen-activated protein kinase 4 (Fragment)18785e-208
B9GQC1 Predicted protein17396e-192
A5AD40 Putative uncharacterized protein17253e-190

Arabidopsis top hits (Blast detail)Scoree value
AT4G01370.1 ATMPK4 (ARABIDOPSIS THALIANA MAP KINASE 4); MAP kinase/ kinase18935e-212
AT1G01560.2 ATMPK11; MAP kinase/ kinase17304e-193
AT2G46070.1 MPK12 (MITOGEN-ACTIVATED PROTEIN KINASE 12); MAP kinase/ kinase15602e-173
AT4G11330.1 ATMPK5 (MAP KINASE 5); MAP kinase/ kinase15289e-170
AT1G07880.2 ATMPK13; MAP kinase/ kinase14241e-157

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
67  33%
 
98  38%
 
122  10%
 
112  10%
 
82  10%

Unigene MembersMember information