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Information for unigene UN13039

FASTA Sequence
Unigene ID: UN13039Length: 1438  SNP
GAGAGCTCTCTTTGTGCAGCCGACTCTTTTGTTGCTAGATGAACCCACCAACCATCTTGACCTGAGAGCTGTTCTCTGGTTGGGGG
AGTATCTCTGTCGCTGGAAGAAGACGTTGGTCGTTGTTTCCCACGACCGTGACTTCCTCAACACTGTCTGCACGGATATAATACAT
TTGCACGACCAGAATCTCCACTTCTACCGTGGCAACTTCGATAGTTTCGAAAGTGGATACGAGCGGCGACGCAAGGAGATGAACAA
AAAGTTTGAGATTTACGATAAACAGGTTAAAGCAGCTAAGAGATCTGGAAACCGTGCTCAGCAGGAGAAGGTAAAGGACAAGGCCA
AGTTCACTGCGGCGAAAGAAGCATCCAAGAGTAAGGGAAAAGGTAAGGCGGATGGCCCAGCACCTGAAGCTCCGAGAAAGTGGAGA
GACTATAGCGTTGAGTTTCATTTCCCGGAACCAACCGAGCTCACTCCTCCTCTCCTGCAGTTGATCGAGGTTAGCTTCTGCTACCC
GAATAGACCAGACTTCAGGCTCTCGGATGTTGATGTGGGTATCGATATGGGTACAAGGGTCGCTATAGTTGGGCCTAATGGAGCTG
GAAAGTCCACTCTTTTGAACCTTCTTGCTGGAGATTTAGTTCCGAGTGAAGGTGAAGTGAGAAGAAGCCAGAAGCTGAGGATTGGG
AGATACTCTCAGCACTTTGTTGACCTGTTAACAATGGGGGAGACACCAGTTCAGTATCTGCTCCGCCTTCATCCTGACCAAGAGGG
ATTTAGCAAACAGGAAGCTGTGCGTGCTAAGCTAGGCAAGTTTGGGCTACCGAGTCACAACCACTTGACTCCGATCATGAAACTGT
CCGGTGGACAAAAAGCTAGAGTTGTGTTCACTTCGATCTCAATGTCTAAGCCACACATTTTGCTTCTTGACGAGCCTACGAATCAC
TTAGACATGCAGAGCATAGATGCGTTGGCTGATGCGCTAGAGGAGTTCAGTGGAGGAGTTGTGCTGGTGAGTCACGACTCTAGACT
TATTTCGCGTGTCTGTGAGGATGAGGAGAAGAGTCAGATTTGGGTTGTGGAAGACGGAACAGTGTCTTTCTTCGATGGCACGTTTG
AAGAGTACAAGGAAGATCTGCAAAGAGAGATCAGAGCAGAGGTCGATGAGTTGATCGTTGTGTTGTTGTTGGCTTTTAAAGGTAAA
ACTGAAAGCTCTTTATATTCTCAGACTTGGAAAAAGTTTTGGACTAAAGTTTATTTTATAGACATTGTGTGTGTTTTCTTCGTCAT
ATATACGTTAATGGCATGAAACCATATACGTTTTCCCCATGTTACATAGTCGAGTGTAGTATTATGTTTTGTGGGAAGCAAGGATA
TGTCTTTCATTTTTTATTTCATGAATGTGTGTTTCATTGAGCATAATAAACAACAATTCTCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_567001 ABC transporter F family member 4 [Arabidopsis thaliana]18841e-208
AAM61469 putative ABC transporter [Arabidopsis thaliana]18761e-207
XP_002876258 ATGCN4 [Arabidopsis lyrata subsp. lyrata]18761e-207
CAN74169 hypothetical protein VITISV_001188 [Vitis vinifera]18527e-205
CAN68174 hypothetical protein VITISV_041068 [Vitis vinifera]18527e-205

Swiss-Prot top hits (Blast detail)Scoree value
Q9M1H3 ABC transporter F family member 418972e-211
Q8NE71 ATP-binding cassette sub-family F member 19349e-100
Q7YR37 ATP-binding cassette sub-family F member 19349e-100
Q767L0 ATP-binding cassette sub-family F member 19312e-099
Q6MG08 ATP-binding cassette sub-family F member 19284e-099

TrEMBL top hits (Blast detail)Scoree value
A5B4Z6 Putative uncharacterized protein18615e-206
A5BPR3 Putative uncharacterized protein18615e-206
B9RUV8 ATP-dependent transporter, putative18411e-203
A5BN36 Putative uncharacterized protein18265e-202
Q65CB1 ABC transporter18032e-199

Arabidopsis top hits (Blast detail)Scoree value
AT3G54540.1 ATGCN4; transporter18972e-212
AT1G64550.1 ATGCN3; transporter8074e-086
AT5G60790.1 ATGCN1; transporter7412e-078
AT5G64840.1 ATGCN5 (A. THALIANA GENERAL CONTROL NON-REPRESSIBLE 5); transporter2733e-024
AT5G09930.1 ATGCN2; transporter2537e-022

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
114  31%
 
95  38%
 
61  8%
 
71  8%
 
82  15%

Unigene MembersMember information