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Information for unigene UN13045

FASTA Sequence
Unigene ID: UN13045Length: 964  SNP
GGGCATCTCTCTCTTTCCCTGTTTCTGAGATTTTCTTCGGCTTTTTTTTCCCCTGTCTGTCCGTCTGTATCTTTGTCATTCTTATC
GCAGATCTCGAGGAAAGTTTACGCAATCGATTCAAAGTTTGTGTTTGTTTGATTGATTGTTTTTTTTGCGATGGGTACGTCGTCGG
GGCAAGCAGAATTTGATTACTTGTTCAAAGTGTTGTTGATCGGAGATTCTGGTGTTGGGAAAAGCTCTCTCTTGTTGAGTTTCACA
TCTAATACCTTTGATGATCTGTCTCCCACTATAGGTGTGGATTTTAAGGTTAAGTATCTTACCATTGGAGACAAGAAACTCAAGCT
TGCCATTTGGGATACAGCTGGGCAAGAGAGGTTTAGGACGCTAACAAGTTCATATTACAGAGGAGCTCAGGGCATTATAATGGTGT
ATGATGTGACACGACGAGACACATTCACAAATCTATCAGATATATGGGCCAAGGAAATCGACCTTTACTCGACTAATCAGGATTGC
ATCAAGATGCTTGTTGGCAATAAAGTCGACAAGGAGAGTGAAAGAGCTGTCTCTAAAAAAGAAGGCATAGACTTTGCTCGGCAGTA
CGGATGTTTGTTTCTCGAGTGTAGTGCAAAGACTCGTGTCAACGTTGAGCAATGTTTCGAAGAGCTTGTTCTTAAGATTTTGGAAA
CGCCTAGTCTTACTGCTGAAGGTTCGTCTGGAGGGAAGAAGAACATCTTCAAACAGAACCCAGCACAAACAAGCAGTGCTTCATCG
AGCTACTGCTGCTCTTTTTAGACATGGCTTTACGGTTTATTACGCAAAGTACACTCTTGTTTGTCTTCTTGTTCTCGGTTTCTCTT
TTTCCCAAAAATACTGCAGCATCTTGGATGTAAAAATCTTAACCCTGATTTCAAAGTTGTGTTCCCTGTTTTTACTTGATCAAAGG
CTAAAAAAATAACTGATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002893966 hypothetical protein ARALYDRAFT_473785 [Arabidopsis lyrata subsp. lyrata]10666e-114
NP_175056 Ras-related protein Rab-18 [Arabidopsis thaliana]10594e-113
XP_002520256 protein phosphatase 2c, putative [Ricinus communis]9483e-100
XP_002520255 protein with unknown function [Ricinus communis]9421e-099
ACU23007 unknown [Glycine max]9412e-099

Swiss-Prot top hits (Blast detail)Scoree value
P36862 GTP-binding protein yptV35842e-059
Q5ZLG1 Ras-related protein Rab-185448e-055
Q0IIG8 Ras-related protein Rab-185402e-054
Q9NP72 Ras-related protein Rab-185402e-054
Q5R5H5 Ras-related protein Rab-185402e-054

TrEMBL top hits (Blast detail)Scoree value
O23657 AtRab1810593e-113
B9S2N7 Protein phosphatase 2c, putative9482e-100
B9S2N6 Putative uncharacterized protein9429e-100
C6TJB7 Putative uncharacterized protein9411e-099
C6SWE3 Putative uncharacterized protein9331e-098

Arabidopsis top hits (Blast detail)Scoree value
AT1G43890.1 ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18); GTP binding10591e-115
AT1G43890.2 ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18); GTP binding10591e-115
AT1G43890.3 ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18); GTP binding10591e-115
AT5G03530.1 RABC2A (RAB GTPASE HOMOLOG C2A); GTP binding / GTP-dependent protein binding / myosin XI tail binding8002e-085
AT3G09910.1 ATRABC2B (ARABIDOPSIS RAB GTPASE HOMOLOG C2B); ATP binding / GTP binding / transcription factor binding7151e-075

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
106  60%
 
83  30%
 
121  10%

Unigene MembersMember information