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Information for unigene UN13064
FASTA Sequence |
Unigene ID: UN13064 | Length: 988 |
SSR | | GAGGGAACTCTGTGACCAGGTTCTGTCTCTTTCTGAGTACAGAGCTCAGCTTTACGACTACTTGAAGAGCAGGATGAACACGATTG
CGCCGAACCTGACCAGCCTCGTTGGTGAGCTCGTCGGTGCTCGTCTGATCTCTCACGGTGGTAGTTTGTTGAACCTCTCAAAGCAG
CCTGGAAGCACTATTCAGATTCTTGGAGCTGAGAAGGCTCTGTTCAGAGCTCTGAAGACCAAGCACGCCACTCCTAAGTACGGTCT
GATCTACCATGCTTCTGTGGTTGGCCAAGCTGCGCCGAAGAACAAGGGTAAAATCTCAAGGTCGCTGGCTGCGAAAGCTTCGCTTG
CTATCCGTTGTGATGCTCTTGGTGATGGGGAGGACAATAGTATGGGAGTTGAGAACCGTTTAAAGCTTGAAGCAAGGTTGAGAAGT
CTGGAAGGGAAAGACGCAGGACGTCTCTCTGGCTCAGCTAAAGGCAAACCAAAGATTGAGGCTTATGACAAGGATAAGAAGGTTGG
ATCTGGTGGTCTGATCACTCCTGCTAAGACTTACAACACTGCTGCTGACTCTGTTATTGGACAAACTTCTAAAGCTGAGGACAGTG
TGAAGAAGGATAAAAAGAAGAAGAAGAAGGCTGAAGCAGAGGAGGAAGAAGCCAAGACTGAGGAACCATCTAAGAAGAAGTCAAAG
AAGAAGAAGGCTGAAGTAGAGCCTGAGACCGAAGAGCCCAAATCTGAGGAACCTTCAAAGAAGAAGAAGAAGAGGAAGCACGAGGA
AGAAGAAACTGAGATGCCTGCCAAGAAAAAGGAAAAGAAGGATAAGAAGAAGAAGAAGAGTGAGGCTTGAAGACAGAGAGTTCATT
GTCCTTTTTTGTTTTTGTTTCTTGCCCTTAGGTGTTATTTTGAAACTTTTAAGAACCGGTCATCGATTTGTAAGGCTTATTAGTTG
TTTTCCCCAGAAACTTGCATTTCTAATGAATTTGATTAAAGT
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GenBank top hits (Blast detail) | Score | e value |
NP_198064 putative nucleolar protein 5-1 [Arabidopsis thaliana] | 1163 | 3e-125 |
XP_002874406 hypothetical protein ARALYDRAFT_489610 [Arabidopsis lyrata subsp. lyrata] | 1149 | 1e-123 |
XP_002884489 hypothetical protein ARALYDRAFT_896572 [Arabidopsis lyrata subsp. lyrata] | 1116 | 9e-120 |
NP_187157 putative nucleolar protein 5-2 [Arabidopsis thaliana] | 1097 | 1e-117 |
AAC16330 SAR DNA-binding protein-1 [Pisum sativum] | 984 | 2e-104 |
Swiss-Prot top hits (Blast detail) | Score | e value |
O04658 Probable nucleolar protein 5-1 | 1163 | 1e-126 |
Q9MAB3 Probable nucleolar protein 5-2 | 1097 | 7e-119 |
Q4R779 Nucleolar protein 58 | 658 | 5e-068 |
Q6DFW4 Nucleolar protein 58 | 642 | 4e-066 |
Q9Y2X3 Nucleolar protein 58 | 640 | 7e-066 |
TrEMBL top hits (Blast detail) | Score | e value |
O65334 SAR DNA-binding protein-1 | 984 | 1e-104 |
B7FLW5 Putative uncharacterized protein | 965 | 2e-102 |
O65335 SAR DNA-binding protein-2 | 963 | 4e-102 |
B8APG2 Putative uncharacterized protein | 938 | 3e-099 |
Q10LH4 Nucleolar protein NOP5, putative, expressed | 938 | 3e-099 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT5G27120.1 SAR DNA-binding protein, putative | 1163 | 1e-127 |
AT3G05060.1 SAR DNA-binding protein, putative | 1097 | 6e-120 |
AT5G27140.1 SAR DNA-binding protein, putative | 578 | 9e-060 |
AT1G56110.1 NOP56 (Arabidopsis homolog of nucleolar protein Nop56) | 497 | 2e-050 |
AT3G12860.1 nucleolar protein Nop56, putative | 456 | 1e-045 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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