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Information for unigene UN13064

FASTA Sequence
Unigene ID: UN13064Length: 988 SSR 
GAGGGAACTCTGTGACCAGGTTCTGTCTCTTTCTGAGTACAGAGCTCAGCTTTACGACTACTTGAAGAGCAGGATGAACACGATTG
CGCCGAACCTGACCAGCCTCGTTGGTGAGCTCGTCGGTGCTCGTCTGATCTCTCACGGTGGTAGTTTGTTGAACCTCTCAAAGCAG
CCTGGAAGCACTATTCAGATTCTTGGAGCTGAGAAGGCTCTGTTCAGAGCTCTGAAGACCAAGCACGCCACTCCTAAGTACGGTCT
GATCTACCATGCTTCTGTGGTTGGCCAAGCTGCGCCGAAGAACAAGGGTAAAATCTCAAGGTCGCTGGCTGCGAAAGCTTCGCTTG
CTATCCGTTGTGATGCTCTTGGTGATGGGGAGGACAATAGTATGGGAGTTGAGAACCGTTTAAAGCTTGAAGCAAGGTTGAGAAGT
CTGGAAGGGAAAGACGCAGGACGTCTCTCTGGCTCAGCTAAAGGCAAACCAAAGATTGAGGCTTATGACAAGGATAAGAAGGTTGG
ATCTGGTGGTCTGATCACTCCTGCTAAGACTTACAACACTGCTGCTGACTCTGTTATTGGACAAACTTCTAAAGCTGAGGACAGTG
TGAAGAAGGATAAAAAGAAGAAGAAGAAGGCTGAAGCAGAGGAGGAAGAAGCCAAGACTGAGGAACCATCTAAGAAGAAGTCAAAG
AAGAAGAAGGCTGAAGTAGAGCCTGAGACCGAAGAGCCCAAATCTGAGGAACCTTCAAAGAAGAAGAAGAAGAGGAAGCACGAGGA
AGAAGAAACTGAGATGCCTGCCAAGAAAAAGGAAAAGAAGGATAAGAAGAAGAAGAAGAGTGAGGCTTGAAGACAGAGAGTTCATT
GTCCTTTTTTGTTTTTGTTTCTTGCCCTTAGGTGTTATTTTGAAACTTTTAAGAACCGGTCATCGATTTGTAAGGCTTATTAGTTG
TTTTCCCCAGAAACTTGCATTTCTAATGAATTTGATTAAAGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_198064 putative nucleolar protein 5-1 [Arabidopsis thaliana]11633e-125
XP_002874406 hypothetical protein ARALYDRAFT_489610 [Arabidopsis lyrata subsp. lyrata]11491e-123
XP_002884489 hypothetical protein ARALYDRAFT_896572 [Arabidopsis lyrata subsp. lyrata]11169e-120
NP_187157 putative nucleolar protein 5-2 [Arabidopsis thaliana]10971e-117
AAC16330 SAR DNA-binding protein-1 [Pisum sativum]9842e-104

Swiss-Prot top hits (Blast detail)Scoree value
O04658 Probable nucleolar protein 5-111631e-126
Q9MAB3 Probable nucleolar protein 5-210977e-119
Q4R779 Nucleolar protein 586585e-068
Q6DFW4 Nucleolar protein 586424e-066
Q9Y2X3 Nucleolar protein 586407e-066

TrEMBL top hits (Blast detail)Scoree value
O65334 SAR DNA-binding protein-19841e-104
B7FLW5 Putative uncharacterized protein9652e-102
O65335 SAR DNA-binding protein-29634e-102
B8APG2 Putative uncharacterized protein9383e-099
Q10LH4 Nucleolar protein NOP5, putative, expressed9383e-099

Arabidopsis top hits (Blast detail)Scoree value
AT5G27120.1 SAR DNA-binding protein, putative11631e-127
AT3G05060.1 SAR DNA-binding protein, putative10976e-120
AT5G27140.1 SAR DNA-binding protein, putative5789e-060
AT1G56110.1 NOP56 (Arabidopsis homolog of nucleolar protein Nop56)4972e-050
AT3G12860.1 nucleolar protein Nop56, putative4561e-045

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  40%
 
113  60%

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