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Information for unigene UN13064
| FASTA Sequence |
| Unigene ID: UN13064 | Length: 988 |
SSR | | GAGGGAACTCTGTGACCAGGTTCTGTCTCTTTCTGAGTACAGAGCTCAGCTTTACGACTACTTGAAGAGCAGGATGAACACGATTG
CGCCGAACCTGACCAGCCTCGTTGGTGAGCTCGTCGGTGCTCGTCTGATCTCTCACGGTGGTAGTTTGTTGAACCTCTCAAAGCAG
CCTGGAAGCACTATTCAGATTCTTGGAGCTGAGAAGGCTCTGTTCAGAGCTCTGAAGACCAAGCACGCCACTCCTAAGTACGGTCT
GATCTACCATGCTTCTGTGGTTGGCCAAGCTGCGCCGAAGAACAAGGGTAAAATCTCAAGGTCGCTGGCTGCGAAAGCTTCGCTTG
CTATCCGTTGTGATGCTCTTGGTGATGGGGAGGACAATAGTATGGGAGTTGAGAACCGTTTAAAGCTTGAAGCAAGGTTGAGAAGT
CTGGAAGGGAAAGACGCAGGACGTCTCTCTGGCTCAGCTAAAGGCAAACCAAAGATTGAGGCTTATGACAAGGATAAGAAGGTTGG
ATCTGGTGGTCTGATCACTCCTGCTAAGACTTACAACACTGCTGCTGACTCTGTTATTGGACAAACTTCTAAAGCTGAGGACAGTG
TGAAGAAGGATAAAAAGAAGAAGAAGAAGGCTGAAGCAGAGGAGGAAGAAGCCAAGACTGAGGAACCATCTAAGAAGAAGTCAAAG
AAGAAGAAGGCTGAAGTAGAGCCTGAGACCGAAGAGCCCAAATCTGAGGAACCTTCAAAGAAGAAGAAGAAGAGGAAGCACGAGGA
AGAAGAAACTGAGATGCCTGCCAAGAAAAAGGAAAAGAAGGATAAGAAGAAGAAGAAGAGTGAGGCTTGAAGACAGAGAGTTCATT
GTCCTTTTTTGTTTTTGTTTCTTGCCCTTAGGTGTTATTTTGAAACTTTTAAGAACCGGTCATCGATTTGTAAGGCTTATTAGTTG
TTTTCCCCAGAAACTTGCATTTCTAATGAATTTGATTAAAGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_198064 putative nucleolar protein 5-1 [Arabidopsis thaliana] | 1163 | 3e-125 |
| XP_002874406 hypothetical protein ARALYDRAFT_489610 [Arabidopsis lyrata subsp. lyrata] | 1149 | 1e-123 |
| XP_002884489 hypothetical protein ARALYDRAFT_896572 [Arabidopsis lyrata subsp. lyrata] | 1116 | 9e-120 |
| NP_187157 putative nucleolar protein 5-2 [Arabidopsis thaliana] | 1097 | 1e-117 |
| AAC16330 SAR DNA-binding protein-1 [Pisum sativum] | 984 | 2e-104 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O04658 Probable nucleolar protein 5-1 | 1163 | 1e-126 |
| Q9MAB3 Probable nucleolar protein 5-2 | 1097 | 7e-119 |
| Q4R779 Nucleolar protein 58 | 658 | 5e-068 |
| Q6DFW4 Nucleolar protein 58 | 642 | 4e-066 |
| Q9Y2X3 Nucleolar protein 58 | 640 | 7e-066 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O65334 SAR DNA-binding protein-1 | 984 | 1e-104 |
| B7FLW5 Putative uncharacterized protein | 965 | 2e-102 |
| O65335 SAR DNA-binding protein-2 | 963 | 4e-102 |
| B8APG2 Putative uncharacterized protein | 938 | 3e-099 |
| Q10LH4 Nucleolar protein NOP5, putative, expressed | 938 | 3e-099 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G27120.1 SAR DNA-binding protein, putative | 1163 | 1e-127 |
| AT3G05060.1 SAR DNA-binding protein, putative | 1097 | 6e-120 |
| AT5G27140.1 SAR DNA-binding protein, putative | 578 | 9e-060 |
| AT1G56110.1 NOP56 (Arabidopsis homolog of nucleolar protein Nop56) | 497 | 2e-050 |
| AT3G12860.1 nucleolar protein Nop56, putative | 456 | 1e-045 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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