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Information for unigene UN13082

FASTA Sequence
Unigene ID: UN13082Length: 1484  SNP
CAGCTTTGAGTCGTCTCTATTTCGAATCCGCTGTCTCCGATACGCTTTTTGCCGGCGCGGTAGATCGTACAAATCCTAAGATAAGA
GAGAAAATGTGGGGAATCTTGAGGCGAAGTGCCGTCGATGGAGGAGGCTTCTCTTCTTCGTCTCTCGGAAAGACGCGATTCGCTTT
GGTTTCCGCAAGGAGCTATGCAGCTGGTTCAAAAGAGATGACAGTCAGAGACGCTCTGAACTCTGCAATTGATGAGGAGATGTCTG
CGGATCCTAAAGTTTTTGTCATGGGTGAAGAGGTTGGACAATATCAGGGTGCCTACAAGATCACTAAAGGCCTTTTGGAGAAGTAT
GGTCCTGAGAGAGTTTACGATACCCCTATTACCGAGGCTGGATTTACTGGAATTGGAGTTGGTGCCGCCTATGCTGGCTTAAAGCC
CGTTGTAGAATTTATGACTTTCAACTTTTCTATGCAGGCAATTGATCATATCATAAACTCTGCTGCAAAGTCGAATTACATGTCTG
CTGGACAGATAAATGTACCCATTGTCTTTAGAGGACCCAATGGTGCTGCTGCTGGTGTTGGTGCTCAGCATTCTCAGTGCTATGCA
GCATGGTACGCTTCAGTACCTGGTTTGAAAGTTCTTGCTCCATATTCAGCTGAAGATGCTCGTGGTCTTCTGAAAGCTGCTATTAG
AGACCCTGACCCTGTTGTCTTCCTTGAAAACGAGTTACTATATGGTGAATCATTTCCAATTTCAGAAGAAGCACTTGATTCAAGTT
TCTGTCTTCCCATAGGCAAAGCCAAGATTGAACGAGAAGGAAAGGATGTAACCATAACAACTTTCTCCAAGATGGTCGGTTTTGCC
CTCAAGGCAGCTGAGAAGCTCGCAGAGGAGGGAATAAGTGCTGAGGTAATAAATCTGCGGTCAATCCGTCCGCTAGACAGAGCAAC
CATCAATGCTTCAGTGAGAAAGACAAGTAGATTGGTAACAGTTGAAGAAGGTTTCCCTCAGCATGGAGTCTGTGCAGAAATCTGTG
CTTCGGTAGTAGAGGAGAGCTTTTCATACTTGGATGCACCGGTGGAGAGGATAGCAGGAGCTGATGTTCCGATGCCTTACGCAGCT
AACCTAGAGAGATTGGCTCTTCCTCAGGTAGAGGATATCGTTCGAGCAGCAAAGAGAGCTTGTTACAGATCCAAATAAAGAATATG
ATCATCTTCAGAAACCCCACCCCCAACACAAATAAGAAAAAAAGAGGAGAAAATGACGTCTCTTTTTGCTACAAACAACCGTTCCT
TGTGATTTTATTTGATCTCTTTTGATATTGTTAATCCTCTGCCCTGCGGTTTTCATTTTTCCTTTTTGTCTTGCGAATTGAAAGTT
ATACATCTTTTGGGGTCTAGTGAAAGAGTTCATAACACCTTCCTTTTTCTTTGTGAAATGATTGGGCAGGCAAATCCCGCAAGTTT
AATGAATTGAGGTTCCTACTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34206 unnamed protein product [Thellungiella halophila]17981e-198
XP_002864080 pyruvate dehydrogenase E1 component beta subunit, mitochondrial [Arabidopsis lyrata subsp. lyrata]17693e-195
NP_199898 pyruvate dehydrogenase E1 component subunit beta [Arabidopsis thaliana]17532e-193
AAA52225 pyruvate dehydrogenase E1 beta subunit [Arabidopsis thaliana]17452e-192
CBI38172 unnamed protein product [Vitis vinifera]15776e-173

Swiss-Prot top hits (Blast detail)Scoree value
Q38799 Pyruvate dehydrogenase E1 component subunit beta, mitochondrial17531e-194
P52904 Pyruvate dehydrogenase E1 component subunit beta, mitochondrial14804e-163
Q86HX0 Pyruvate dehydrogenase E1 component subunit beta, mitochondrial11642e-126
Q09171 Pyruvate dehydrogenase E1 component subunit beta, mitochondrial11086e-120
P32473 Pyruvate dehydrogenase E1 component subunit beta, mitochondrial10862e-117

TrEMBL top hits (Blast detail)Scoree value
B9RFW4 Pyruvate dehydrogenase, putative15712e-172
A9P841 Putative uncharacterized protein15703e-172
B9GMQ4 Predicted protein15685e-172
B7FJJ4 Putative uncharacterized protein15641e-171
Q6Z1G7 (Rice Genome Annotation Project) pyruvate dehydrogenase E1 component subunit beta15632e-171

Arabidopsis top hits (Blast detail)Scoree value
AT5G50850.1 MAB1 (MACCI-BOU); catalytic/ pyruvate dehydrogenase (acetyl-transferring)17547e-196
AT1G30120.1 PDH-E1 BETA (PYRUVATE DEHYDROGENASE E1 BETA); pyruvate dehydrogenase (acetyl-transferring)6963e-073
AT2G34590.1 transketolase family protein6793e-071
AT1G55510.1 BCDH BETA1 (BRANCHED-CHAIN ALPHA-KETO ACID DECARBOXYLASE E1 BETA SUBUNIT); 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring)/ catalytic5592e-057
AT3G13450.1 DIN4 (DARK INDUCIBLE 4); 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring)/ catalytic5557e-057

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
201  14%
 
92  29%
 
102  29%
 
122  29%

Unigene MembersMember information