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Information for unigene UN13082
| FASTA Sequence |
| Unigene ID: UN13082 | Length: 1484 |
| SNP | CAGCTTTGAGTCGTCTCTATTTCGAATCCGCTGTCTCCGATACGCTTTTTGCCGGCGCGGTAGATCGTACAAATCCTAAGATAAGA
GAGAAAATGTGGGGAATCTTGAGGCGAAGTGCCGTCGATGGAGGAGGCTTCTCTTCTTCGTCTCTCGGAAAGACGCGATTCGCTTT
GGTTTCCGCAAGGAGCTATGCAGCTGGTTCAAAAGAGATGACAGTCAGAGACGCTCTGAACTCTGCAATTGATGAGGAGATGTCTG
CGGATCCTAAAGTTTTTGTCATGGGTGAAGAGGTTGGACAATATCAGGGTGCCTACAAGATCACTAAAGGCCTTTTGGAGAAGTAT
GGTCCTGAGAGAGTTTACGATACCCCTATTACCGAGGCTGGATTTACTGGAATTGGAGTTGGTGCCGCCTATGCTGGCTTAAAGCC
CGTTGTAGAATTTATGACTTTCAACTTTTCTATGCAGGCAATTGATCATATCATAAACTCTGCTGCAAAGTCGAATTACATGTCTG
CTGGACAGATAAATGTACCCATTGTCTTTAGAGGACCCAATGGTGCTGCTGCTGGTGTTGGTGCTCAGCATTCTCAGTGCTATGCA
GCATGGTACGCTTCAGTACCTGGTTTGAAAGTTCTTGCTCCATATTCAGCTGAAGATGCTCGTGGTCTTCTGAAAGCTGCTATTAG
AGACCCTGACCCTGTTGTCTTCCTTGAAAACGAGTTACTATATGGTGAATCATTTCCAATTTCAGAAGAAGCACTTGATTCAAGTT
TCTGTCTTCCCATAGGCAAAGCCAAGATTGAACGAGAAGGAAAGGATGTAACCATAACAACTTTCTCCAAGATGGTCGGTTTTGCC
CTCAAGGCAGCTGAGAAGCTCGCAGAGGAGGGAATAAGTGCTGAGGTAATAAATCTGCGGTCAATCCGTCCGCTAGACAGAGCAAC
CATCAATGCTTCAGTGAGAAAGACAAGTAGATTGGTAACAGTTGAAGAAGGTTTCCCTCAGCATGGAGTCTGTGCAGAAATCTGTG
CTTCGGTAGTAGAGGAGAGCTTTTCATACTTGGATGCACCGGTGGAGAGGATAGCAGGAGCTGATGTTCCGATGCCTTACGCAGCT
AACCTAGAGAGATTGGCTCTTCCTCAGGTAGAGGATATCGTTCGAGCAGCAAAGAGAGCTTGTTACAGATCCAAATAAAGAATATG
ATCATCTTCAGAAACCCCACCCCCAACACAAATAAGAAAAAAAGAGGAGAAAATGACGTCTCTTTTTGCTACAAACAACCGTTCCT
TGTGATTTTATTTGATCTCTTTTGATATTGTTAATCCTCTGCCCTGCGGTTTTCATTTTTCCTTTTTGTCTTGCGAATTGAAAGTT
ATACATCTTTTGGGGTCTAGTGAAAGAGTTCATAACACCTTCCTTTTTCTTTGTGAAATGATTGGGCAGGCAAATCCCGCAAGTTT
AATGAATTGAGGTTCCTACTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34206 unnamed protein product [Thellungiella halophila] | 1798 | 1e-198 |
| XP_002864080 pyruvate dehydrogenase E1 component beta subunit, mitochondrial [Arabidopsis lyrata subsp. lyrata] | 1769 | 3e-195 |
| NP_199898 pyruvate dehydrogenase E1 component subunit beta [Arabidopsis thaliana] | 1753 | 2e-193 |
| AAA52225 pyruvate dehydrogenase E1 beta subunit [Arabidopsis thaliana] | 1745 | 2e-192 |
| CBI38172 unnamed protein product [Vitis vinifera] | 1577 | 6e-173 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q38799 Pyruvate dehydrogenase E1 component subunit beta, mitochondrial | 1753 | 1e-194 |
| P52904 Pyruvate dehydrogenase E1 component subunit beta, mitochondrial | 1480 | 4e-163 |
| Q86HX0 Pyruvate dehydrogenase E1 component subunit beta, mitochondrial | 1164 | 2e-126 |
| Q09171 Pyruvate dehydrogenase E1 component subunit beta, mitochondrial | 1108 | 6e-120 |
| P32473 Pyruvate dehydrogenase E1 component subunit beta, mitochondrial | 1086 | 2e-117 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RFW4 Pyruvate dehydrogenase, putative | 1571 | 2e-172 |
| A9P841 Putative uncharacterized protein | 1570 | 3e-172 |
| B9GMQ4 Predicted protein | 1568 | 5e-172 |
| B7FJJ4 Putative uncharacterized protein | 1564 | 1e-171 |
| Q6Z1G7 (Rice Genome Annotation Project) pyruvate dehydrogenase E1 component subunit beta | 1563 | 2e-171 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G50850.1 MAB1 (MACCI-BOU); catalytic/ pyruvate dehydrogenase (acetyl-transferring) | 1754 | 7e-196 |
| AT1G30120.1 PDH-E1 BETA (PYRUVATE DEHYDROGENASE E1 BETA); pyruvate dehydrogenase (acetyl-transferring) | 696 | 3e-073 |
| AT2G34590.1 transketolase family protein | 679 | 3e-071 |
| AT1G55510.1 BCDH BETA1 (BRANCHED-CHAIN ALPHA-KETO ACID DECARBOXYLASE E1 BETA SUBUNIT); 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring)/ catalytic | 559 | 2e-057 |
| AT3G13450.1 DIN4 (DARK INDUCIBLE 4); 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring)/ catalytic | 555 | 7e-057 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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