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Information for unigene UN13085

FASTA Sequence
Unigene ID: UN13085Length: 849  SNP
GGATCCATCTTACATATATATTACTCGTCATCAGGAATTCATGTTTTCTCTCTGACAAGAGAACTCAGAGTAAGTAAGAATGGTAC
AGACGAAGAAGTTCAGAGGTGTCAGGCAACGCCATTGGGGTTCTTGGGTCGCTGAGATTCGCCATCCTCTCTTGAAACGGAGAATT
TGGCTTGGGACGTTTGAGACGGCAGAGGAGGCAGCAAGAGCCTACGACGAGGCGGCTGTTTTAATGAGCGGCCGCAACGCCAAGAC
TAACTTCCCCCTCAACAACAACAACACAGGAGACACATCGGAGGGCAAAACAGATATTTCATCCTCCTCTTCATCACTTTCTTCTA
TCCTCAGCGCCAAACTGAGGAAATGCTGCAAGTCTCCTTCGCCTTCCCTCACCTGCCTCCGTCTTGACACAGCCAGCTCCCACATC
GGCGTCTGGCAGAAGCGAGCCGGTTCCAAGTCCGACTCCAGTTGGGTCATGACGGTGGAGCTAGGTCCCGCTGGCTCCTCCCAAGA
GCCTACTAAAAATGCTTCGCAAGACGATGTTGGTCCGGCCACTGAAGTTGGCGGCGGCGGAGGAGGAGAAGAAGGAGCAATGGACG
AAGAAGAGAAAGCTGCTTTGCAAATGATAGAGGAGCTTCTCAATACAAACTAAATATTATTTGCCTATATATACCTATTTTTATTG
CTGATTTACCGCCATAATTATTAATTATACCCATATATATGCCATGTATCGTGTTTATATTTATATGTGATAGTTATAAGTTGTTT
TATATTTCGTTTTATGTCCAATAAAGTATTAGTATTTGTAACTACAATCCAGAAGTGAACTTTTTCTTTTGTGAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABB55256 AP2 transcription factor [Brassica juncea]8632e-090
XP_002890099 hypothetical protein ARALYDRAFT_471733 [Arabidopsis lyrata subsp. lyrata]8497e-089
ABB55257 AP2 transcription factor [Brassica carinata]8424e-088
XP_002517624 DNA binding protein, putative [Ricinus communis]6525e-066
NP_001148685 ethylene responsive element [Zea mays]6382e-064

Swiss-Prot top hits (Blast detail)Scoree value
Q9LFN7 Ethylene-responsive transcription factor SHINE 25374e-054
Q3E958 Ethylene-responsive transcription factor SHINE 34882e-048
Q9XI33 Ethylene-responsive transcription factor WIN14497e-044
Q94AW5 Ethylene-responsive transcription factor ERF0032803e-024
P16146 Protein PPLZ022534e-021

TrEMBL top hits (Blast detail)Scoree value
A1X3G8 AP2 transcription factor8631e-090
A1X3G9 AP2 transcription factor8423e-088
B9RV55 DNA binding protein, putative6523e-066
B6T5Z6 Ethylene responsive element6381e-064
C5XXV9 Putative uncharacterized protein Sb04g0069706263e-063

Arabidopsis top hits (Blast detail)Scoree value
AT5G11190.1 SHN3 (shine3); DNA binding / transcription factor5374e-055
AT5G25390.2 SHN2 (shine2); DNA binding / transcription factor4882e-049
AT1G15360.1 SHN1 (SHINE 1); DNA binding / sequence-specific DNA binding / transcription factor4505e-045
AT5G25190.1 ethylene-responsive element-binding protein, putative2803e-025
AT1G78080.1 RAP2.4 (related to AP2 4); DNA binding / transcription factor2321e-019

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
94  44%
 
83  33%
 
112  22%

Unigene MembersMember information