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Information for unigene UN13106
| FASTA Sequence |
| Unigene ID: UN13106 | Length: 1973 |
| SNP | GGAATTGAAGACTCTCTGGTTTGGTATGAATCAACAGAAAACACAGAGAGAAGAAGAGTAGCCATGGATTTCGCTTCTTGTTCGAT
CCTTAACAATCTCCAGCTTTCTTCTTGCACAAAGTCTCATCCTTTCACGACTAACCTGTGGTCACACGACACTGGAAGAAGACGAC
GAAGTTCCTTGGCTTTTCTTGATTGCCCAGAAAGATCCCAGATTCTCGGAAAATGCCTGCGAGTGCATAGACAGAGTTCCTCCACG
CGCTGCTTATCAGCGAGCCGTGAAGATGCAAACCCATCTGAAGAACTCGCCGTGATACTTGAGGTTGATGGGGTAATGATTGATAC
ATGGTCTAGTAATCGCCAGGCTTTCAATGTAGCTTTTAAAAAGCTTGGGCTTGACTGTGCTAATTGGCCTGAACCAGTTTATGCCG
ACCTGTTGAGAAAAGGTGCTGCTGATGAAGAGAAAATGTTGGTTTTGTATTTCAACCAGATTGGATGGCCTTCCTCCTTGCCAACC
AATGAGAAAGGGACTTTTGTAAAAAGTGTATTGCGAGAAAAGAAAAATGCCATGGATGAGTTTCTGATGTCGAAAAGCTTACCTCT
CAGATCTGGAGTCCAAGAGTTTATCGATAATGCATACACGGAGAAAGTACCCGTTGCTATCGCAACAGCCTACTTCAAGAGTGGAG
ACAAAGTAGCCTTATCCATTGTGGAGATGCTTGGCGAAGAAAGACTTCCCAGTGTGAAGGTTATTGGAGACAGTGAGGTGGAACAG
AGTATGTATGGACAACTTGTTCTTGGCAAAGGAGTTTCTTCAAGTCTAGAGGAGCAACTAGTCAAGGAAGTCAAAAAAGCAGCATC
CGCTGAGAAACAGAGGATAGCAGAAGAAGTTGCATCGATGCTAAAGCTTAGTGTGGACATTGACACAAGCTCATCTGAGAGATTGG
AGAAAATTGTGGTTGCATTGCGTGCTGCTGCAGAGTATACTGGATTACCTGTTAGAAACTGTGTACTTGTTGCTGGTAGTCAATCT
GGAGTTTCTGCTGCAAAGATGATAGGCATGCCTTGTGTAGTCATGAGAAGCAGTTTAACTGCAAGAGGTGAGTTTCCATCAGCAAA
AGGTGTAATGGATGGATTTGGAGGTGCAGACTTGACCATTCAAAAACTTAGGCACAAGATCAAGCCTTGAAGAAACAATTTCAAGA
AAGCCGTCTCAGAGTGTGTTTGTTTATTTCTGGTGAAGTTTTCAGGTTGATGATATTTTATCTGTTGCTACATGCTGTAACATATT
TGATTCTTTGTAATGTACTTTTTTGATTAGTTTTCTCAAAAACTAATGTCTATTTTATATTCCAACGCTCTACGAACCTTTTTCTT
GTCTAGCCTAAGAAGAAAACCAGAGAATTCACAAAATGAGCTTCAAGGAAACATAAGTTGGTTATATAGCTAACCAAGATTTTAAA
AACTTCAGTTACTTCTTCAAGGTTTTATTTTGACATGATTCCGTTTCCAAGTCGAGACATCACCTATTTATACAGACACATACTCT
TCCATGGTAAATCTTTCACTTCTAAGTTGGTTTACATTTCAGTAATCTCTGTTTCTCGTACGTTGCTGGTGTTTCGTCTCTGAACC
GGAGCAGGGCTCGAGTATTCTGCATCATCATCAGCCAATGATGATATGTTTGATGAGACAGATTCAGCTACTGTGTTTGAGACGGA
GTGTGAGGGAGATTGGTGTCTGTAGCTTTGGGAAGCTGAGTATTCTGGTACTCCTTGAGTTGTTTTTCCTTGAGCTTCTTCCGCAA
GCTTCCTTAGAAGATTCATAACAGTTGGAAGAAACTTTGATGTGACGGAGAGTACTCCAGCAAGTGCGCCATGTTGAAACTCCCTA
GGAACGTCAAGCTGCACCCATAAGGCTTTGGAGAGTAAAAACGCCACAAACAGGCCTAAGAGGTACAAAGGATTCCTCAAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002863521 hypothetical protein ARALYDRAFT_494462 [Arabidopsis lyrata subsp. lyrata] | 1573 | 3e-172 |
| NP_199330 CbbY protein-like protein [Arabidopsis thaliana] | 1551 | 9e-170 |
| BAB11390 unnamed protein product [Arabidopsis thaliana] | 1084 | 1e-115 |
| XP_002321787 predicted protein [Populus trichocarpa] | 1025 | 9e-109 |
| XP_002515825 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis] | 1007 | 1e-106 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q6NMA9 At5g45170 | 1551 | 6e-170 |
| Q9FKE8 Genomic DNA, chromosome 5, TAC clone:K18C1 | 1084 | 9e-116 |
| B9ICF9 Predicted protein | 1025 | 6e-109 |
| B9RQ06 2-deoxyglucose-6-phosphate phosphatase, putative | 1007 | 7e-107 |
| Q2QLS0 CbbY protein, putative, expressed | 991 | 5e-105 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G45170.1 CbbY protein-related | 1558 | 5e-173 |
| AT5G45160.1 root hair defective 3 GTP-binding (RHD3) family protein | 532 | 5e-054 |
| AT3G13870.2 RHD3 (ROOT HAIR DEFECTIVE 3); GTP binding | 237 | 7e-020 |
| AT3G13870.1 RHD3 (ROOT HAIR DEFECTIVE 3); GTP binding | 237 | 7e-020 |
| AT1G72960.1 root hair defective 3 GTP-binding (RHD3) family protein | 212 | 6e-017 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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