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Information for unigene UN13128
| FASTA Sequence |
| Unigene ID: UN13128 | Length: 1369 |
SSR | | GATGGAGAAATAATCAGAATGCACTAAAATTATGAATGAAACAAATATTTGGAGATTGATTGGCTGTATCAGAAAAACTAAAACAG
TGTTCTTGTTCATTCCTATCATCATGCTTTATTACTACACAGCAAATTCAACAGCTCTGCTTTCTTCATCTTTGAAATCCCTTTAA
GACCCCTTGATTTTGCTATGGCTCTAAGTTCTATCAACTTCAGTGCACTCAAGTCTTCATCTTTCTCAGTTTCTTCCTCAGCATTG
ATAGACTCATCATCATCATCATCATCTTCATCAACTGCTAATTCATCTACAATGACATCATGATCCTCATCCTCCTCATGGTAAAA
TGACTCTGGTTTCAGCTCTGGCTCTGATTCGAGAAGGCCAAGTCCTGGTTCAGATTCAGGTTCATAAACAGGCTCGGGCTCGTATT
CAGGTTCATCACGTGAATCCACTTGATCCTTTTTCTGAGTCCAAGTCACACTGTAACTTGACGCCTCATCAAAAATGGCCTCACTA
GAGTAGCTGGACTGAGGCTTATGTCTCGGTACAGGTGAATTGCGCCTGAAGCTTGAGGCTGGCCTGGTAAAACGTGTTGCATTATG
ATCCCTGTTTCGCGAATCAAAATGATTGGAACTGTGAACCTGTCTTTCAGCATCATCATCATCATCATCATGATCATCTCCTTGTA
GCTGCTTTTCAGAATCAAAGTTGCTAACGTTCTTCTTGCTCTGTTCTCCTGAGTGCTTCCTCAGTAACTTAAGAAGAGAGTCCACA
GTCTCAGTCTCTTTTCCTCCCTGTCCTTTAGAAGCTTCTTCAGTCTTCTTATCTTCTTTCTTAGCAGCAGCTCGAGCTCGGAGCTG
AGCTTGGACTTTCCTGAAAAGATCAACTATCTCTTTCTCTCTTGGTCCAGGTGATGAAGTCGCCTGGAACTTCGGGGAACTAGATA
GGGAGAACACAGGACCATTCTTGGAAGACAGCATCTCAGAGTCTTCAAGACCACCACCACCACCGTCTAAACCGTCTCTATCTTCG
TTCCGCCTGTTCCTATTACCTCTGAAACCATTCCTATTGTTTCTTGAGAAATCAGGATTGTTTCTCCTATGGCCAGAAGAACTTGC
TCGGCACACAAATGAAATTCTCTTAGGGGCGGCATATCCTCCATTCTCGATGCGAACCAGACAGGAAGAGAAAGGTAATACATCAA
GTGTTTTTCTAGAGACAACAGAGTTAGAGAAGCTCCTGCTGCTGTCTGAAACTCCATAACCAGGAATGTAATTAGAAGTAAGCTGC
AAAGTTCCTGAAAGCGCCATGAACAGAGATAGAGAGAGGTTTAGCTTCTTCTTCTTCCTTTTGCATTGGCTTTTCTCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002879308 hypothetical protein ARALYDRAFT_320865 [Arabidopsis lyrata subsp. lyrata] | 1359 | 1e-147 |
| XP_002862788 hypothetical protein ARALYDRAFT_920271 [Arabidopsis lyrata subsp. lyrata] | 1214 | 7e-131 |
| XP_002892326 ATP binding protein [Arabidopsis lyrata subsp. lyrata] | 1108 | 1e-118 |
| NP_563761 Rho termination factor [Arabidopsis thaliana] | 1103 | 5e-118 |
| AAF80216 Contains a weak similarity to an unknown protein T16B12.4 gi|3746061 from Arabidopsis thaliana BAC T16B12 gb|AC005311. ESTs gb|AI999279, gb|Z30507, gb|AI997722, gb|Z26742 come from this gene | 1094 | 5e-117 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8L4E7 SAP-like protein BP-73 | 448 | 2e-043 |
| Q75JC9 Uncharacterized protein DDB_G0271670 | 148 | 1e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q94K75 Putative uncharacterized protein At1g06190 | 1103 | 3e-118 |
| Q9LNC8 F9P14.5 protein | 1094 | 4e-117 |
| Q8LFT8 Putative uncharacterized protein | 1083 | 7e-116 |
| A8MQM6 Uncharacterized protein At1g06190.2 | 856 | 1e-089 |
| Q3EBR1 Putative uncharacterized protein At2g31150.1 | 820 | 2e-085 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G06190.1 ATP binding / ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism | 1121 | 1e-122 |
| AT2G31150.1 ATP binding / ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism | 956 | 2e-103 |
| AT1G06190.2 ATP binding / ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism | 873 | 9e-094 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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