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Information for unigene UN13136

FASTA Sequence
Unigene ID: UN13136Length: 1498 SSR 
GGATCTCTTTTAAAATTGATTCTAGGGTTCATTCATCTCCCTCAAAGCTCTCTCTCATTCATTATCCTTCTCCATCAAACAGAGAG
AGAGAGAGCGTAATCATGAACGCCGTGGCATCGAGTTTCGCTCAATCTCCCTCCTTTCTTCGTCGAACTCCCAAAACCGCCTCTGG
TTCGATTCTCCTGACGTCAACCTCCCCTGGCTTCATCCGATTCGGTTCCGGACCTCAATTTCGCCACAGAAACAGCTCTTGTCTTA
AACTCTCGAGACCATCACAAAGCCGAACAACTTCTCTCAAGTCTCGGACAAGCTTTGTCGTCAAAGCTTCAGCTTCAGGTGATGCG
TCGTCCGACTCAATTGCGCCGCTTCAGTTGAAGTCTCCCGTGGGGCAGTTTCTGTCGCAGATACTCGTCAGCCATCCTCATCTCGT
CCCTGCAGCTGTCGAACAACAGCTCGAACAGCTTCAAATCGACCGAGAAGCCGAGCAACAGATCAACAAAGACTCTTCCTCCTCCT
CTCTTCCTCCTGCAACAGACATTGTTCTTTACAGGAGAATAGCTGAGGTTAAGGAGAAAGAGAGAAGAAGGGCTTTGGAAGAGATT
TTATATGCTTTAGTTGTTCAGAAGTTCATGGACGCTAATGTTTCACTTGTACCTTCCATTACCTCCTCCTCTGGGAGAGTTGATAC
TTGGCCCACCCAAGAAGACGGGGAGCTCGAGCAGCTTCACTCCCCCGAGGTCTACGAGATGATTCAGAATCATCTCTCCATCATTC
TCAAAAACCGTGAGGGTGATCTCTCCACCGTGGCGCAGATAAGCAAGCTCGGTGTTGGACAGGTCTATGCTGCTTCCGTCATGTAT
GGCTATTTCCTGAAGCGGATCGACCAGAGGTTTCAGCTCGAGAAGACGATGAAGATTCTTCCAGGTTGGTCTGATGAAGGAGGCGA
GACTACTAGCATTGAGCAAGCCGGGAGGGAAGCAGAGAGAAGCTTCTATGGAGAAGCAGAAGAAGAGAGTTATCAAGCTGTATCCT
CAATGGGAGGGATTAATGCCAGTGGTGGTTCCAGCAGCGAAACAACGAAACAGTCCCGGTTAAAGACGTACGTCATGTCCTTCGAT
GGAGAAACTCTTCAGAGATACGCTACGATTAGATCGAGAGAAGCGGTTGGGATCATTGAGAAGCACACGGAGGCCTTGTTTGGGAG
GCCTGAGATTGTGATAACACCGCAAGGGATTGATTCGTCCAAGGACGAGCATATAAAGATCAGTTTCAAGGGACTGAAGAGGCTTG
TGTTGGAGGCTGTGACGTTTGGTTCGTTCCTCTGGGATGTGGAGAGTCATGTGGATTCGAGGTATCACTTCGTACTGAACTGAAAT
TTGTTTGTGTGTGTGTTTTGGGTGATACTTGTAGTTCTCTTGGAGGCTTTGGTGGGTTTTCTTTTTATCTTGTTGCTCTCTGAAAA
CTTAGATTCATTAATACCTAAATGTTAAATTGCTGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_175278 uncharacterized protein [Arabidopsis thaliana]16117e-177
XP_002894114 hypothetical protein ARALYDRAFT_473985 [Arabidopsis lyrata subsp. lyrata]16036e-176
BAJ34170 unnamed protein product [Thellungiella halophila]13132e-142
NP_566588 uncharacterized protein [Arabidopsis thaliana]12981e-140
AAL32564 Unknown protein [Arabidopsis thaliana]12953e-140

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9LP80 At1g48450/T1N15_516213e-178
Q9LVJ0 Gb|AAF02142.112989e-141
Q8W4L9 Putative uncharacterized protein At3g1780012952e-140
Q0WNF6 Putative uncharacterized protein At3g1780012934e-140
C6TNM4 Putative uncharacterized protein11511e-123

Arabidopsis top hits (Blast detail)Scoree value
AT1G48450.1 unknown protein16221e-180
AT3G17800.1 mRNA level of the MEB5.2 gene (At3g17800) remains unchanged after cutting the inflorescence stem13343e-147
AT3G17800.2 mRNA level of the MEB5.2 gene (At3g17800) remains unchanged after cutting the inflorescence stem13173e-145
AT1G48450.2 unknown protein11453e-125
AT1G32160.1 unknown protein7162e-075

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
105  56%
 
82  22%
 
91  11%
 
71  11%

Unigene MembersMember information