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Information for unigene UN13153
| FASTA Sequence |
| Unigene ID: UN13153 | Length: 1433 |
SSR | | GGAAGGGGAAGAAGCCATTGTCTCAATTACTCCGTCCCCCTTTGATCAATCTCTACGTAAAAAGCACGAACCTTTAAACCCGGTTC
TTTTCTGTCCGCACACACACAAAAGCATTAAGATCACCCCCCTTTTGTCCGTATCCTCTCTCTTCTCTCTCTCTATGGGCAACGTG
AACGCGAGAGACGAAGCGAACAGTAGCCACCACCACCACCACAACAGCAACAACAACAACGCATCTCAACTCGAAGACAACAACGA
CGGTGAGATTCATCAACCCATGTCTTCTTCCGACACCACCGCACCTCCTCCTCCTGAGCTCATGGGTCAATCTCCTCCTCAATCAC
CTCGCGCCACTCAATCTCCTCTCATGTTTGCTCCTCAGGTTCCGGTGCTTCCTCTTCAAAGACCAGATGAAATCCACATCCCTAAC
CCTTCCTGGATGCAATCTCCTTCCTACGAAGAGGCTTGTAACGAGCAAGGTATCCCCACCATGATCACTTGGTGCCATGGTGGTAA
GGAGATTGCTGTCGAAGGTTCTTGGGATAATTGGAAGACAAGAAGTCGGCTTCAGAGATCTGGGAAAGACTTCACTATAATGAAAG
TCTTGCCTTCAGGTGTCTATGAGTACAGGTTCATCGTTGATGGACAGTGGAGGCATGCCCCTGAGCTCCCTCTCGCTCGTGATGAC
GCTGGCAACACTTTCAACCTCTTGGACCTCCAGGACTATGTACCAGAAGACATTGAAAGCATATCTGGTTTTGAGCCACCGCAATC
ACCAGAAGCTAGTTACAGCAGCTTGCTTCTAGGAGCTGAGGACTACTCCAAAGAACCGCCTCTGGTTCCGCCGCACCTGCAGATGA
CACTGCTGAACTTGCCTCCAGCAAGCCCTGACATTCCATCACCGCTGCCGAGACCTCAGCACGTCATTCTCAACCATCTCTACATG
CAGAAAGGCAAAAGCGGTCCGTCTGTGGTTGCCCTTGGTTCCACTCACCGCTTTCTGGCCAAGTACGTCACTGTGGTGCTCTACAA
GTCCCTCCAGAGGTGAGAAAAGATGATAGTGCTCAGTTCTCGTAAAGCATGTGGGGAAACTCAGACATGCTTAGTATCTAATTTCA
TGGAGAAGAATGAATGTGAGGCTATAATAGGATATATGCGAAGAAGAGGAAGAAGAGTTTATCATCATCATCACAGGCAAAAAAGT
ATTTTCCCTCTCAATAAGCTCGAATTTTGTTGTCTTGTCAATAAGGTTTTAGCAACATAATGAAAGATGCATTGTTCAGTCATGTG
TAATCTTTTGATTTCAAGACTTTTTTTATTTATCTCTTCTCTTTTCTTAGAATAATTTAGAAAAAAAAAGAGAACTGAGACTTCAC
TTGTAAAACCAGCAATTCTCTTTTTCTGTTTTGTTTTGTGGCTTTCAAGTTTTCACG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| Q9SCY5 RecName: Full=SNF1-related protein kinase regulatory subunit beta-2; Short=AKIN subunit beta-2; Short=AKINB2; Short=AKINbeta2 | 1300 | 7e-141 |
| NP_193369 SNF1-related protein kinase regulatory subunit beta-2 [Arabidopsis thaliana] | 1274 | 8e-138 |
| NP_001190741 SNF1-related protein kinase regulatory subunit beta-2 [Arabidopsis thaliana] | 1274 | 8e-138 |
| CAB10413 kinase like protein [Arabidopsis thaliana] | 1271 | 2e-137 |
| XP_002870164 AMP-activated protein kinase [Arabidopsis lyrata subsp. lyrata] | 1267 | 5e-137 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SCY5 SNF1-related protein kinase regulatory subunit beta-2 | 1300 | 3e-142 |
| Q84VQ1 SNF1-related protein kinase regulatory subunit beta-1 | 663 | 2e-068 |
| Q9QZH4 5'-AMP-activated protein kinase subunit beta-2 | 351 | 3e-032 |
| Q6PAM0 5'-AMP-activated protein kinase subunit beta-2 | 347 | 1e-031 |
| O43741 5'-AMP-activated protein kinase subunit beta-2 | 202 | 7e-015 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q2V3H9 Uncharacterized protein At4g16360.2 | 1257 | 5e-136 |
| B9IH18 Predicted protein | 1085 | 4e-116 |
| B9HCD2 Predicted protein | 1082 | 1e-115 |
| B9SA62 Snf1-kinase beta subunit, plants, putative | 1069 | 3e-114 |
| Q7XYX7 AKIN beta2 | 996 | 9e-106 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G16360.1 AMP-activated protein kinase | 1275 | 2e-140 |
| AT4G16360.2 AMP-activated protein kinase | 1258 | 2e-138 |
| AT5G21170.1 5'-AMP-activated protein kinase beta-2 subunit, putative | 664 | 2e-069 |
| AT5G21170.2 5'-AMP-activated protein kinase beta-2 subunit, putative | 594 | 2e-061 |
| AT2G28060.1 protein kinase-related | 226 | 1e-018 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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