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Information for unigene UN13173

FASTA Sequence
Unigene ID: UN13173Length: 1007  SNP
AAAGACCGACGGGCGACGACGAAGGAGAAGGAAAGAGGTTCTGATTCTTATCTTTCTAAAAAATGTTTCTCCGGTCGTCGCAGAAG
CTATGGACGGTGGTGGCCTTCATGATTCTAGTTATTTCGTCGCGTGTAGCACACTCGCTTCACTTCGATCTGCACTCTGGTCGGAC
AAAGTGTATCGCGGAAGACATCAAGAGCAATTCGATGACTGTCGGAAAGTACAGCGTCGATAACCCTCACGAAGGCCACGATTTGC
CTCAATCTCACAAGATCTCCGTCAAGGTGACGTCAAGCAACGGGAACGCGTACCATCACGCGGATCAAGTGGCGTCTGGGCAGTTC
GCGTTCTCGGCAGTGGAAGCAGGGGACTACATGGCGTGTTTCTCCGCCGTTGATCATAAGCCTGAGGTGACTCTTAGCATTGATTT
TGAGTGGAGGACGGGTGTTCAATCCAAGAGCTGGGCTACTGTTGCCAAGAAGAGCCAAGTCGAAACCATGGAGTTTGATGTGAAGA
GCCTTCTTGATACTGTCAACTCGATTCATGAAGAGATGTTTTACCTTAGAGAAAGGGAAGAGCAAATGCAAGATTTGAACCGGTCT
ACAAACACTAAAATGGCATGGTTGAGTTTACTCTCTTTGTTCGTCTGCATAGGAGTGGCAGCAATGCAGTATGTACACTTGAAGAC
TTTTTTCGAGAAGAAGAAAGTCATCTAAAGGTTTATTATAGGCAGTCAAGTCAGTCACACACGCTCTCAATCTACTCTTCTTTCTT
TGGATGTTGTATATTAGTTCAATGCCTCTGCTGCAAGCATGTTTCTCTTGAGACTTGGGACTTTTTTAATTTATGTGGCAGTATTT
GTCCTTTTTCTTGGAGATGGGTTTAGTTTTTTATTGTTTAGATTTGTTGGTCCTTGATGCTTGGATATGATTTGATGGTTTAAAAT
TAAAGAAAGTGTGCATTCTCAGTTTCAGACAACAGAGAAAGGACATGTACACTTTTCTGAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_177105 emp24/gp25L/p24 family/GOLD domain-containing protein [Arabidopsis thaliana]9457e-100
XP_002888720 emp24/gp25L/p24 family protein [Arabidopsis lyrata subsp. lyrata]9322e-098
AAG60114 unknown protein [Arabidopsis thaliana]9223e-097
NP_564256 emp24/gp25L/p24 family/GOLD domain-containing protein [Arabidopsis thaliana]8722e-091
AAM67291 unknown [Arabidopsis thaliana]8642e-090

Swiss-Prot top hits (Blast detail)Scoree value
P49755 Transmembrane emp24 domain-containing protein 102751e-023
Q5E971 Transmembrane emp24 domain-containing protein 102714e-023
Q28735 Transmembrane emp24 domain-containing protein 102689e-023
Q5RE32 Transmembrane emp24 domain-containing protein 102671e-022
Q63584 Transmembrane emp24 domain-containing protein 102652e-022

TrEMBL top hits (Blast detail)Scoree value
Q8VY92 Putative uncharacterized protein At1g694609454e-100
Q9C791 Putative uncharacterized protein9222e-097
Q9LQY3 T24P13.78721e-091
Q8LFL9 Putative uncharacterized protein8641e-090
C6TH02 Putative uncharacterized protein7351e-075

Arabidopsis top hits (Blast detail)Scoree value
AT1G69460.1 emp24/gp25L/p24 family protein9462e-102
AT1G26690.1 emp24/gp25L/p24 family protein8736e-094
AT1G14010.1 emp24/gp25L/p24 family protein7284e-077
AT2G03290.1 protein transmembrane transporter6522e-068
AT3G29070.1 protein transmembrane transporter5904e-061

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
69  50%
 
105  28%
 
94  22%

Unigene MembersMember information