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Information for unigene UN13181

FASTA Sequence
Unigene ID: UN13181Length: 754 SSR 
TACATCTCTAAAACCCCATTTATCTTTGGCTTTTCGTTCAATAAACTGGGAACTTCCCTCCTTTCACAGCTTCCTCCTAACTCTTT
TACCTTTGCTCACTTAGGCATCATCAAGGCCTGGCTCTCTTGTTACTGCAAGTTGGGCATTTGTAATGCTTGATGTGTTCCGCTTT
TGCAGGTGTTATCTTCACACATTTCCCATGGAACCATTTCTCACACGCGTCGCAGCAGATCCAGAACTCGTCTGTACCGTCACTGT
CTCCACAAGCGCACAGACCGCACCTTGTTCGTCGTCTTCGTCCTCGTCCTCACTCTCGTCTTCTTCTTTCGGCGGTGGAGATGACA
TCTTTGGAACCTTCAAGCCGTTGGATTTGCTTTTGCTACTGTTGTTGTTGTTGTTGTTGTTGGCAGATAGATCCTTGGATTGCTTT
GCATTGCCTGTCACAATCTCGAAAATGGTTGGGAGCTCGTTTATCATCTGGAAGAGCTTCTTCCTCTCGTTCTTACCAAACCCAAA
ACGTGCACCAAAGTAGAACGCGACAGAGAGGAGCCAGGAATCACTGTGAACAGCGACCAGAGACACCCAGTCCTTTTCTTGCATCC
CGTCTCTAGCGAAGTTGATGCCAAGAGCAGGCTCAGGAAGCTCGGGAGGAACTTCCTCGACGGGAAGATTAACCTCCCATGTCTCG
TTAGGAAGTCCGTAGAGGCACAAGTTCTCTTAATTATCAGATAATTAGAAAATCCGAGGAAGAAGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_001189502 protein alfin-like 6 [Arabidopsis thaliana]7018e-072
XP_002875129 PHD finger family protein [Arabidopsis lyrata subsp. lyrata]6758e-069
AAF43952 Contains similarity to an Alfalfa nucleic acid binding protein from Medicago sativa gb|L07291.1 and contains a PHD-finger PF|00628 domain. ESTs gb|AI995787, gb|AA721930, gb|T42258 come from this gene [Arabidopsis thaliana]6571e-066
NP_172903 protein alfin-like 7 [Arabidopsis thaliana]6571e-066
XP_002892811 PHD finger family protein [Arabidopsis lyrata subsp. lyrata]6552e-066

Swiss-Prot top hits (Blast detail)Scoree value
O81488 PHD finger protein At5g262105204e-052
Q9W0T1 Nucleosome-remodeling factor subunit NURF3011583e-010

TrEMBL top hits (Blast detail)Scoree value
Q8LA16 At1g145106577e-067
Q9M9R2 F14L17.29 protein6577e-067
Q8LAH0 Putative PHD-type zinc finger protein6532e-066
Q8S8M9 Putative PHD-type zinc finger protein6532e-066
B9S053 ATP synthase alpha subunit mitochondrial, putative6228e-063

Arabidopsis top hits (Blast detail)Scoree value
AT2G02470.1 AL6 (ALFIN-LIKE 6); DNA binding / methylated histone residue binding6782e-071
AT1G14510.1 AL7 (ALFIN-LIKE 7); DNA binding / methylated histone residue binding6574e-069
AT3G42790.1 AL3 (ALFIN-LIKE 3); DNA binding / methylated histone residue binding5241e-053
AT5G26210.1 AL4 (ALFIN-LIKE 4); DNA binding / methylated histone residue binding5203e-053
AT5G20510.1 AL5 (ALFIN-LIKE 5); DNA binding / methylated histone residue binding5177e-053

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  50%
 
61  50%

Unigene MembersMember information