 |
Information for unigene UN13186
| FASTA Sequence |
| Unigene ID: UN13186 | Length: 1115 |
| SNP | GCTCTGAAGCCAACTAAATCATTATGAAGTAAATAAAAACAATCAAAATTGCAATAGCGTTTTTTTCAAGTGGTTTGCGTTTAGCC
TCATACAGATTCTTTTTTTAAGGAAAATATAGTAAAATAGACTTCTGCTTGGCTGCTTCTAATTCATTTTGATGATGAGATCATTG
ATCTTGTCTTCACGGTTTCCAGTATCTCCTCCATCGCTGAAAACTTGTTTCTTACCGTGCAAGACACCAGCCTCTGGCTTGTTGAG
TTTCAAGGGTCCCAAGAATCTCATGACCTCTCTGAAATGATCACCAACTCTTGCTATCTCATTCACAATGTCTTCTATGCAAAAGA
TACCATGTTCTCCTAGAGCCTGTTCGATTATGTTGTTGTCGGTAAGAGGAACAGGATTGCCTTCTATTATTGTGTATCCCTTTTTG
AATATAAGATCCTTAACGCTCTTACCATTCGGGTACCCATAAGTGACGTAAGGCTGCACTTTGAGAAGCTTTTGAAACAAACCATC
AGTTGCTTTGGCAAATACACCAGTGAAAGTGCTCCTTAGTTGCATACTGTTGAGAACCTTCTTGGTCTTTGGGTGCATATCATTCT
TGCCTTGTATGCGAATGATGAAAACGAGGTTTGATTTTACTGGTGGAGGAGATGCTCTTGGCCTCTTCACCCTTTGCTTCATCCGG
ATAAGATCTATTTCCTTAGCCCTGAACTCAAGCACAAAGTCTTCAGGTCGTTTGATATCAGCAACTTTCTTCTTCTTCTTACCGAA
ATTGCCTAACTCAAGTTGCTTCTTCCTGATAAAGGCAAGCTCATCCCTGTTCTTTCTCTTCTTAAGTATAACCTCCGGTATGTAGT
CCAAACCCTTATTAGCTTCTTCTACAGCCATCACCTTAGGTTCTTCCACAGCCATCACCTTAGCTTCTTCTTCAGCCATTACTATT
ATCTCTACTCTCTTTTCTCTCTCGGTGGAGACGAAGCAATCGAACGGTGGCTGAAGAGATTCCAAGTTAATACGGCGGCAATATCG
TACTTTTGGTTCGAGAACCGCTCTGTTTGAGAGTTAGGGTTTATCTCTGTCTGTTAAGACAGACCTATTTACGGTCCGGGTCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002889274 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1153 | 6e-124 |
| NP_178190 60S ribosomal protein L7-1 [Arabidopsis thaliana] | 1114 | 2e-119 |
| XP_002297799 predicted protein [Populus trichocarpa] | 757 | 5e-078 |
| XP_002304722 predicted protein [Populus trichocarpa] | 746 | 9e-077 |
| XP_002527311 60S ribosomal protein L7, putative [Ricinus communis] | 730 | 7e-075 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SAI5 60S ribosomal protein L7-1 | 1114 | 8e-121 |
| P60040 60S ribosomal protein L7-2 | 510 | 9e-051 |
| Q9LHP1 60S ribosomal protein L7-4 | 508 | 2e-050 |
| P60039 60S ribosomal protein L7-3 | 502 | 8e-050 |
| O01802 60S ribosomal protein L7 | 490 | 2e-048 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WU42 Putative ribosomal protein L7 | 1114 | 1e-119 |
| B9GMC3 Predicted protein | 757 | 3e-078 |
| B9GVJ2 Predicted protein | 746 | 6e-077 |
| B9SMU2 60S ribosomal protein L7, putative | 730 | 4e-075 |
| B3TM16 60S ribosomal protein L7-like protein | 650 | 8e-066 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
