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Information for unigene UN13202

FASTA Sequence
Unigene ID: UN13202Length: 2501  SNP
GGAGAGTGACGGACAAACACGAATCAAAAGACCTAACTCTGTGTTGCTCTGCGTCAAGTTAAAAATCACACAAGAAAGCAAATATT
TCTGTCACTGATGGATCCCATGGAATCGTCTGGTGAAGAGAACATTGTGGAAGAGAGTCATAAGCTGGTTGACTCATTGGACAAGC
TTCGTGTTAGTGCTGGCAGCTCTTCCTCCAATTTCAAGAAGAAGCCTGTTATTATCATTGTTGTTGGAATGGCTGGCAGTGGAAAA
ACTAGTTTCCTTCATCGTTTGGTCTGCCATACCTTTGATGCAAACAAGCGTGGGTATGTGTTGAACCTTGACCCTGCTGTTATGTC
TCTTCCTTTCGGTGCCAACATCGATATAAGGGACACTGTCAAGTACAAGGAAGTTATGAAGCAGTATAACCTGGGCCCTAATGGTG
GTATTATGACATCTCTCAACTTGTTTGCTACTAAATTCGACGAGGTTGTCTCTGTGATTGAGAAACGTGCAGACCAGCTTGACTAT
GTCCTTGTGGATACTCCTGGTCAGATTGAAATCTTCACATGGTCTGCTTCTGGGGCTATAATCACTGAAGCTTTTGCTTCTACCTT
CCCAACTGTTGTCACCTATGTGGTTGATACTCCACGTTCCACAAGCCCAATCACTTTCATGAGCAACATGCTCTACGCCTGTAGTA
TCCTCTACAAGACCCGGCTGCCTCTTGTCTTGGCTTTCAACAAAACTGATGTGGCAGATCACAAGTTTGCTTTAGAGTGGATGGAA
GATTTCGAGGTGTTTCAAGCAGCGATACAGTCTGATAACTCGTACACATCGACCTTGGCTAACAGCCTCTCCCTCTCACTCTACGA
GTTTTACCGGAATATAAGATCTGTTGGTGTTTCTGCAATCACTGGTGCTGGAATGGATGACTTCTTCAAAGCCATTGAAGCAAGTG
CTGATGAATACATGCAAACTTACAAGGCTGATCTTGACAAGAGAAAGGCGGAGAAGGAGCAGTTGGAAGAAGAGCGAAGGGAAAAG
GAAATGGAGAAACTGAGGAAGGATATGGAGAGTTCTCAGGGAGGGACTGTGGTTCTAAACACTGGCTTGAAAGATAGAGACGCAGC
TGAGAAGATGATGGTTGAGGAAGAGGATGATGATGACTTTAAGATTGAAGAAGACAGTGATGATGCCATAGATGAGGATGAGGAAG
ATGAAGAGATGAATCGTTTCTACGTATAAATTAAACTCAAAAACTAAATCATTCAGACTTTATCAAGTTGCTTCAACTCGTTTTGT
TTGTGTCCTTGCCTTGCTTTCCCCGTTGTGTAGTTAAAACCATGGAGCCTGAATCTCTTTGTGAGACATGGTCTAATGATCTAATG
ATTATCATAAACTAAGAGTGTTGGGAGACTGTGTACACAGTTTACGTTCTTATATGCACAAGGAGGTAAACACATATATGTCAGAC
AAAGGAGAAAACAAAACTAACAAAAACTTCCACATTATCAACAACTATGTAGAACAAGAGTCAATGAGTGAGTTACATCATTTGCC
CTTTTAACATGATCTGAACAGACTTGAACTGTTTTTCTGTGGACGATAAAGATTCAGTCTTGGTGGATTTCATCAAAGGGGGTATG
AGCAAACCTCACATCTTCTGGCCGTGCAACAACGACAGGCTCATCAGCGAATAGGGCTTTGAGGAAAGATGGAGTCTTCAAGGGTC
GTCTATCAGTCATTCGTGGATACACAAATGCCAAGAAGTAGTACGCGTGACCTGCTATCATTCCCAGTAAATCCCCCCAGGGACTT
GCACCAACAAGGACAGAGAACCCAAGAAGCACCCATGGTAAATACGCTGCAGTAAAAGTGAAAAGGCCAAGGAAACTCATGTGGAT
GTAAGGGTTTTGCTTGCTCCATACATAGACCATCATGAAGGTCAAAGAGTTGCTGAGGAAGATGATTTTGGAGAAAGAGACGGACA
AGTAAGGTATCATCCCACCAACGAGAACAATACCGGTGAGAGCAGTTGCTCCGAATAAGAGCATGTAAAGGAAATCAGCAGTCTTT
CCCCTGAAGGAGTTTTCTTCAAGAAGTTTGCAGTATCTAGCAAGGAAGAACATATGGAACAAGAAGTCCAAATCCATGTTACGGAA
GTAAAGGAAGTTAGTAACGAGGCGCCAGAACTGGTATTGCTTCACCACAAGAGTAGGGTTTAGGTATAGGTTATAAGGAGATATAA
TCTCGAGGGAACATCCGACGGTGGTGACAACAGCCGCCGTCAAATACGACCGGGTTATGATCGGCATCTGTTTGTACCATTCTTCT
ACAGCTTGAGCCATACCCTACCGATTCAATCCGACCACCACGAGACAAATTGAACAGAGATTCTTACAAAATTTGAAACCTAATCG
AATCTCTAGAAGCTTCAACGTTGAAAATGAATTTGAAGCAGCTTTGAATTCACGAAAGCGACTGATTAAAAGAGATGATGTTTTCT
TTCTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002869862 ATP-binding family protein [Arabidopsis lyrata subsp. lyrata]17373e-191
NP_193911 XPA-binding protein 1 [Arabidopsis thaliana]17364e-191
AAM66008 putative protein [Arabidopsis thaliana]17275e-190
XP_002512187 xpa-binding protein, putative [Ricinus communis]14202e-154
XP_002314963 predicted protein [Populus trichocarpa]14165e-154

Swiss-Prot top hits (Blast detail)Scoree value
Q8VZ96 Derlin-2.112513e-136
Q9ZS88 Derlin-2.212074e-131
Q851X7 Derlin-210542e-113
Q4G2J3 Derlin-2.210506e-113
Q4G2J4 Derlin-2.110443e-112

TrEMBL top hits (Blast detail)Scoree value
Q8W586 AT4g21800/F17L22_26017363e-191
Q8L9E7 Putative uncharacterized protein17273e-190
B9REL8 Xpa-binding protein, putative14201e-154
B9HX45 Predicted protein14164e-154
B9HIL7 Predicted protein14057e-153

Arabidopsis top hits (Blast detail)Scoree value
AT4G21800.1 QQT2 (quatre-quart2); ATP binding / nucleotide binding17371e-193
AT4G21800.2 QQT2 (quatre-quart2); ATP binding / nucleotide binding17371e-193
AT4G21810.1 DER2.1 (DERLIN-2.1)12567e-138
AT4G04860.1 DER2.2 (DERLIN-2.2)12082e-132
AT4G29330.1 DER1 (DERLIN-1)2234e-018

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
123  12%
 
64  16%
 
1111  44%
 
105  20%
 
82  8%

Unigene MembersMember information