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Information for unigene UN13203

FASTA Sequence
Unigene ID: UN13203Length: 1246  SNP
AAATCTTCAACCATACCGCTTCATAATTTTTTCCAGATTAAATTACCAAAATAATAATTTTCAAGTTAAAAAATATTTCCATAACT
TTACATTCCCCCTTAAAAGTATACAATAAGGGTCCCTAATCTTGAAAATATTTACACTCTACCATCCATACCGTCAAGAAGACCGG
TCCAGATTCCCTTAACCGGAGGAAGCTGTGCAACAAAGGCTTGCCATGGAGGATAACCCACTCCACTTCCTCTTACACGCCCGTCT
AAACGTAGTGACAAATACACCGGAGAGTCTGAAGACACACCAGCAAGCTTCTTCTGCTCATCTAACCACCTTTCCCATTCCGAAAC
AAAAACTGGAGCCACACGCCACAATCTCCTCCTACTCTGACTCACTTCTTCATCCTCACTATCAGTCTCATCAAACTCCAAAACCG
GAGTGTTCCCATCAGTAGCATAAGCCACAACAACCACACCTCTCTCAACAAGCCCCTGAGTAAACTCTTTACTTCTCTTAAACGCT
TCTTCTATGTAACCCCCAGGACCAGCGCAGATCACAAGCCTAGCGATCCCTCTCAGATCACCTACGGATATAACCTTGTTATTCTC
CTCGACCCTCATTTTAAGCTTTGCGAGATTCTCTTCCCTAGAGAGCCTAGCCATTTGAGCGTTCTTGGTCTTGTTCTCACGGAAGT
AGAGGAACGCAAAGAGAGAAGCCGCACCAACGTCGATGCCTAGACCTTTTACTATCTCAAGAACCTCACCTGATCTCGAGGGGTTC
GCTAGTGCACCTATAAGCCTTGAGGTGGCTATTAGTCCACCTAAGGAAGCGCTGGCTATGAAGGCGAGGTAGAAGAACATACGGAC
TGATCTGAATGGAGACAGAACCTCGCTACGGATTCTTGCATCAGCACTGATTTCGGATGAGGAAGAGGGAGAAGGCTCGTCTGCAG
CAAAACACACGGTGTTGAGAGACAGAGGTTGATGATGTTTTCTACTTATCGTTAGAGTCCAAGTGCGAGGAGAAAGAACTTGTGTT
TCTATGTGATTATGACGGGACAACCTGCGAGGAGAGTATGGTTCTTTTGTCTGAATAAGAGTTCGTTTGGTCAAGTGACAATGGTA
GATGTAAGCTTGGGAAGAGGCCAGAGTAGCAGCCATTGGTCTCTGTAGAATCTCTGCGGGCTTCTTCCTCTGTTCATAAGATGACT
TGTGCTTTCATTTTGGATCACCCTCTTTCTTTGGGCATGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_567817 uncharacterized protein [Arabidopsis thaliana]14378e-157
AAK82486 AT4g28740/F16A16_150 [Arabidopsis thaliana]14252e-155
XP_002869476 hypothetical protein ARALYDRAFT_913640 [Arabidopsis lyrata subsp. lyrata]14101e-153
CAA22978 hypothetical protein [Arabidopsis thaliana]14063e-153
XP_002320616 predicted protein [Populus trichocarpa]10013e-106

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q94AF3 AT4g28740/F16A16_15014251e-155
Q9SVU2 Putative uncharacterized protein14062e-153
B9IBD7 Predicted protein (Fragment)10012e-106
B9S593 Putative uncharacterized protein9823e-104
Q7F951 OSIGBa0157A06.4 protein9286e-098

Arabidopsis top hits (Blast detail)Scoree value
AT4G28740.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: LPA1 (LOW PSII ACCUMULATION1); binding (TAIR:AT1G02910.1); Has 65 Blast hits to 65 proteins in 19 species: Archae - 0; Bacteria - 17; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).14382e-159
AT1G02910.1 LPA1 (LOW PSII ACCUMULATION1); binding1433e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
94  57%
 
62  29%
 
111  14%

Unigene MembersMember information