Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN13207

FASTA Sequence
Unigene ID: UN13207Length: 662  SNP
GAGAGTGCCATACGGCCGGGGGACTCACCAAAGCATCAAATACATTTTACTTCTCTTCTATTTCTCTTTATATCTATCATCTTTAG
CTTGTCGTTTGGAAATGGCCACCGTTGAGGTTGAACAAGTGATTGCTCCAGCAGCAGAGAACGTTGAGGTGGCAGCAAAGGCAGTG
GTGGATCCAGATGTGGAGACCAAACAGCCGGAAGAAGTCGTGGCCGCCACGACAGAATCTGCTGCTGCTCCAGCCGCCGTAACTGA
ACAAGAATCTGAATCACCAGTCGTAGAAACGAGCAAAGAAGTGGTTGTTGAAGAGGCAGATAAAAAAGATGAAGAAATAAAAGAGC
CACAGGAAGAAGAGAAGACGGAAGCTCCGGTGGCTGAGGAGGAGGCGAAGATAGAAAAGAAGGAGGAGGTGACTGAAACTCCGGCT
GTTGTGGAGGAGGAGAAGACTGAGTCAGAGGAAGTTGTCGCTGCTGGGGAAGTCGCCGCCGAGAAGGCCGAGGAGTAAAGATGAAG
AAACAATATGTGACCTTCTTTGGTCTCATTTCGTTGTTTTAAAAAGATTACTTCGCAAAATTTCATAAGTATTTTCTATCGTGTGT
TATGATGAAATGATATTTGGTTATGATGAAATGATATATTTGGGAGTTCTGATGGTTGTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002889914 expressed protein [Arabidopsis lyrata subsp. lyrata]2983e-025
EGD75275 hypothetical protein PTSG_12510 [Salpingoeca sp. ATCC 50818]1792e-011
ZP_07730119 serine-rich adhesin, platelet-type [Lactobacillus oris PB013-T2-3]1764e-011
XP_002546349 predicted protein [Candida tropicalis MYA-3404]1747e-011
XP_001744271 hypothetical protein [Monosiga brevicollis MX1]1721e-010

Swiss-Prot top hits (Blast detail)Scoree value
P14328 Spore coat protein SP961654e-011
Q8TFG9 Uncharacterized serine/threonine-rich protein PB15E9.01c1573e-010
O94317 Uncharacterized serine-rich protein C215.131556e-010
Q6S6W0 Glycoprotein gp21484e-009
P28968 Glycoprotein gp21458e-009

TrEMBL top hits (Blast detail)Scoree value
O65370 At1g120802849e-024
C5MID4 Predicted protein1745e-011
A9V7R0 Predicted protein1737e-011
A9UUV5 Predicted protein1729e-011
A9VCR8 Predicted protein1702e-010

Arabidopsis top hits (Blast detail)Scoree value
AT1G12080.2 unknown protein2855e-026
AT1G12080.1 unknown protein1753e-013
AT1G62480.1 vacuolar calcium-binding protein-related1682e-012
AT3G14670.1 unknown protein1181e-006
AT3G14670.2 unknown protein1181e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
67  25%
 
107  25%
 
83  11%
 
116  21%
 
95  18%

Unigene MembersMember information