Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN13230

FASTA Sequence
Unigene ID: UN13230Length: 2403  SNP
AAGGATGATAAGTAACAGTTGATAACATTATAAGTTCCATGACGTTTGCATTCTCAATCTTTGTTGATTTTGGTTTTCAGTAAAAT
ACATGAGATTTTGATTTGAATGATAGCTAGAAGGGGTATGATGCATACATATAAACGCTTCTGTTTATAGACCCCGTTCTAACTTG
TGGTCTGAATGTATAAGCTTTTTTTTTTCTCATAATCCTATCATCTTGTCTGAAAAATGTTCTGAATCATAGACCTTGGTGATTCT
TGAGCTGCATATTCTAACTGAAGCTGTTCATCATTTGTAAGTCTCCATCCCAAAGCACCCAAGTTATCCTCAACATGTCTAACCGA
CTTTATACCCGGTATAGGCACTGTCCCTTTGCATATACACCAGTTTATTGCAACCTGAGGCATAGTCTTTCCTCGTTTCTCCGAAA
TCTCTCTCAGTGCTACAAGGAGAGGCTCTAGTCCAGGAAGAATCTGTCTAAACAGCAATGATCGAGGACCAGTGGGAAGCTTTGAA
GAGGAGTATTTCCCGGTTAGCATTCCTAAACCAAGAGGACTATAAGAGATCAAACGAATCCCGAGCTCCTCGCATACTCTCCTGAT
CTCTTGTTGCTCTTTTCCGTAGCTTAGCAATGAGAACTGCACCTGAGCAGAGCATAAAGGAACCCCTCTGGCTTCGAGGTAATCAT
GAATCTTCAAAAGCTGTTGAGGTCCATAGTTACTGACTCCAACAGCTCGAACTAGCCCCTTCTCGTACATTGCCACTAGACCATCC
CAAAGAGCAAGTTCCTGTAGAGGCGCGTAGTTAGCGGTTGACCAGTGAAGCTGTCCGATCCCGAGCTGGTCTATCTGAAGCCGCTC
TAAAGAAGCGCTGCAAGCATTGACAAACTGTCCTGAAGTTAACCGCCATGGATAAGCTGCAAACTTGGTAGCTATCACAACTTCAC
TCTGTTTCCCTTTTAAGACTTGAGATTGTTTGATGAATTGTCCCAAAAGTCTCTCACTTTGGCCATTGAGCCGACCAGTGCCATAA
GAATCTGCAGTATCAAACAAATTGATTCCGTTTTGCAAAGCCAGCTCGAAAGCCTGTTGGAGCTGATCGTCCATGGAAGTCTGGTA
ACCCCAAAGAAGCTGATTGCCCCAAGCCCATGTCCCAAAACCCATTGGAGAAACACTTAAAGGACCCATTTTCACCTTTTGCCATG
GCCAGAAAAGAGGGAGCTTGAGGGGCTTAAAGGAGGTTGTGTTTGAGTTTGAGCAGTTTATGTTGGTGGTGAAGGTCTTTGCGGTG
GTTGACAGTGTGAACGCCATTTCAAAAGAGTGGAGAATCTTAAGCCTCCGTTCTCAGTGTGTGGCCCAAAATATCTGGATGTCTTT
AGTGATAAACTTCTCTCTACGCTTTTATTTTGATAAACAACAATACAAATGTATTTTTTTTTAACAACAATTCAAATACATCGGAA
TAGTTATAAATTTTGGTCAACCGGGACAAAAACACTAGAAGAAAAATTAGGCTAAAGGAACTAACAAACATGCAAATTTAAAGAGG
AGATGAAAAAATGTGGTAAAACTATGACAATCATAAGCGACCAACAAATAAAATTATCTGTCCACGATGACATTTCAGAAATGAAA
CTGCTTCCACAAACTCGGTTGATGCCTCGCCGTCACACAAGTTCCAGATACCACTCAGAGCTCCAGATTCAATCCGGCTAAGAGAA
GATTCATAGTTACTGAAGATTGATGATGACCGATAAATAAAGAAAGGAGAAATGAGTCATTCTCACGAATCGGCGAGAAACATCGA
AGACTGAAAGAACTCCTAGAAAACGAGAAGACGAACAAGACTCCAGAGATTCAATAACGGGGTTGAAATCAACTGCGGAGTCTCCC
ATGATAAGGAACAGGTTTGATGGACTGGGACTATTAGATGACCAGACACGAATGTCTTCGAGCATCTTGGTGTGCCGATCAGTGTC
AGCTCCTGCTGGAAAGGAAGTGAACTTAGCTTCCTCCTTGAAGTCATGACCATCATCAACGCCATAAGCCATGATCTCAACTTTAC
CAAGATGACCAGCCACAGAAAGCGTCCTTCTGATGTTCTGCGCAGTGGAATAAGCATTGCTCTGAGCATCAATCTTGAATTGGTCT
ATATCCCAGAAGATGCCAGTCCGAGCAATCGCGAAAAAGCCGGGGAAAGGGTTCAGGGGTAAGGGCTTACCCGACATTATTAGAGA
GTTTTAGATCACGGGACCGAATCTATTAAATGGAAGGTAAAGGTTGGTTTCTATAGCATTCCAAGGTGAGACAGATTAGGGTTTAC
ATCTCCAGAAAAAACTGACTACTCCGATTCTACCCTTGAAAAGCAAAATACACTTTTAATTTTCCGAGGGTATTCTAATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_200170 aldo/keto reductase family protein [Arabidopsis thaliana]17382e-191
AAT06472 At5g53580 [Arabidopsis thaliana]17257e-190
XP_002865980 aldo/keto reductase family protein [Arabidopsis lyrata subsp. lyrata]17042e-187
BAB09734 aldo/keto reductase-like protein [Arabidopsis thaliana]15761e-172
XP_002273477 PREDICTED: hypothetical protein [Vitis vinifera]14855e-162

Swiss-Prot top hits (Blast detail)Scoree value
Q94A68 Uncharacterized oxidoreductase At1g06690, chloroplastic5901e-059
Q40648 Probable voltage-gated potassium channel subunit beta2082e-015
Q9PTM4 Voltage-gated potassium channel subunit beta-31885e-013
Q8X529 Uncharacterized protein yghZ1715e-011
Q46851 Uncharacterized protein yghZ1715e-011

TrEMBL top hits (Blast detail)Scoree value
Q56Y42 Aldo/keto reductase-like protein17382e-191
Q6NKP1 At5g5358017255e-190
Q9FJC6 Aldo/keto reductase-like protein15761e-172
B9RPF3 Aldo/keto reductase, putative14702e-160
B8BFM2 Putative uncharacterized protein14163e-154

Arabidopsis top hits (Blast detail)Scoree value
AT5G53580.1 aldo/keto reductase family protein17396e-194
AT1G06690.1 aldo/keto reductase family protein5901e-060
AT3G62050.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF537 (InterPro:IPR007491); BEST Arabidopsis thaliana protein match is: EDA32 (embryo sac development arrest 32) (TAIR:AT3G62210.1); Has 114 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 8; Plants - 103; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2834e-025
AT1G04690.1 KAB1 (POTASSIUM CHANNEL BETA SUBUNIT); oxidoreductase/ potassium channel2306e-019
AT1G60710.1 ATB2; oxidoreductase1751e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
115  36%
 
82  14%
 
123  21%
 
212  14%
 
102  14%

Unigene MembersMember information