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Information for unigene UN13245

FASTA Sequence
Unigene ID: UN13245Length: 771 SSRSNP
GGAGACACGGATAACGCAAAACCTCTCGTCTTCCCAAATTCCACCACCTCACAACGACGACGACGACGATGGCTCTTTCTACTGGA
ATCTTCTCTACCTCCTTCTTCTGCGCCAAAACGGCGCCGTTCCGCAGCTCACCGTCTCTCCGCGTTTCCCCTCATCCGGCTAACCT
GCGCTTGGTGCGAGCCGTGACCTCCGCGACGGCGGCGTCGTCCTCCGAGCCGTCAACCACCAAGGTTCGGGAGCCACGCGGAATCA
TGAAGCCTCGCCCAGTGTCCCCCGAGATGCAGGACGTCGTCGGTGAGCCGGTGATTCCTCGCACGCAGGCTCTCAAACGCATTTGG
GCCTACATCAAGGAGCGCGACCTTCAAGATCCACAAGACAAGAAGGTTATAATCTGCGACGAGAAGCTGAAGAAGATATTTGCAGG
CAAAGACCGTGTCGGCTTCTTGGAGATTGCAAAGCTCATCGGTCCTCACTTCCTCTGAATGAAAATTCGGCTGAGAGATGACTATC
AATCACTAGCGTATGGTTCGGTGTGAGCTATCAAGATATCATATTATATATTAGTAACGTTAGGTTTAAGAACTTTTATGCAACAA
AGTAGTAGTCAATGCCTTCGGACAATATCTTTTGCTTTTGCTGGTTATGTCTTTATTGCTTCCGACTGCAGTTCAAATTTTCTTTG
TTGTCTTAGGACTTGAACAACTCTTTGATGCATCGTTTCTCCATATTGTCAAAAGCCCTACCATTTTAATTTAGACTCAAGTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002869158 hypothetical protein ARALYDRAFT_491238 [Arabidopsis lyrata subsp. lyrata]5781e-057
NP_195155 SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]5476e-054
AAK62445 putative protein [Arabidopsis thaliana]5476e-054
AAM62986 unknown [Arabidopsis thaliana]5361e-052
XP_002885945 SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata subsp. lyrata]4867e-047

Swiss-Prot top hits (Blast detail)Scoree value
O74503 Upstream activation factor subunit spp271583e-010
Q05024 Protein TRI11558e-010
Q08747 Upstream activation factor subunit UAF301531e-009

TrEMBL top hits (Blast detail)Scoree value
Q94F02 Putative uncharacterized protein F10M10.605474e-054
Q9SYZ4 Putative uncharacterized protein AT4g342905474e-054
Q8LDV9 Putative uncharacterized protein5368e-053
O82326 Expressed protein4831e-046
Q8RXG0 Putative uncharacterized protein At2g148804802e-046

Arabidopsis top hits (Blast detail)Scoree value
AT4G34290.1 SWIB complex BAF60b domain-containing protein5482e-056
AT2G14880.1 SWIB complex BAF60b domain-containing protein4845e-049
AT3G03590.1 SWIB complex BAF60b domain-containing protein2417e-021
AT2G35605.1 SWIB complex BAF60b domain-containing protein2372e-020
AT1G31760.1 SWIB complex BAF60b domain-containing protein2282e-019

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  25%
 
123  38%
 
81  13%
 
212  25%

Unigene MembersMember information