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Information for unigene UN13257

FASTA Sequence
Unigene ID: UN13257Length: 903  SNP
AGTATCAACTTAAAACCAAAATTTAAAAACAATAAACGATTTTCCGGAAAGTGTTACAATGGTTTTTGCTAATAAAAAGTTTTGTT
TGTAAAAATATGGTTGTTCATACATCGCAATCAAAAGTAATTTGAGAACCGCTGCGCTGGTTGCATAATAGCACTTTCACTACCAA
ACTTCAAAGGCCTTAAACAGGCAAAAAAAAGAGATTAAAACTGTGCTCACTCTCCTTTGTTCTCTGCTTGCAGAGAAGCTTTAACG
GCTGCTGGATCGTCTTGTGGCCTCATTGCAGGGAAGAGAATAACCTCCTTGATGTTCTGAGAGTCGGTGAATAGCATGGCAAGCCT
GTCAATACCCAACCCCCAGCCACCCGTAGGAGCCAACCCATATTCCAAAGCATTGCAGAAAGTCTCATCTAAAGCCATGGCCTCAT
CGTCTCCAGACTGCCTATCTTTGAGTTGATCAGCAAACCTTTGACGCTGAACCACTGGATCGTTCAGCTCGGTGTAAGCATTGCAG
AGTTCATGTTGGTTGATAAAGAGCTCGAATCTCTCGGTGAGAACATTGTTTGATCTGTGCCACTTTGCCAAGGGAGACATGATCTC
GGGATGGTTGATGATGAAAGTCGGGTTCACACATGTCACTTCCAGAAATTCTCCAACAAGTTTATCTAGCAGACGAGCTGTTGTCT
GAGGAGGAGGGCATTTCACGTCGAACTTGGCACACGCATCAATCAAATACTTGTTGGCTTCTTCACTAGCCAAATCTTTTGGTATA
TTAAGGTTAGCCACCTTCTCCAACTCTCCAATCATCTCAATCCTCCTGAATGGAGGAGTGAAGTCGATTTCGATTGGCTCCTTATC
ATACCCATTAGCATGATACTTGATCTTGTAACCACCTGTCAAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884859 hypothetical protein ARALYDRAFT_478516 [Arabidopsis lyrata subsp. lyrata]11132e-119
NP_187777 Lysyl-tRNA synthetase [Arabidopsis thaliana]10559e-113
XP_002279658 PREDICTED: hypothetical protein [Vitis vinifera]10172e-108
CBI39502 unnamed protein product [Vitis vinifera]10172e-108
XP_002269584 PREDICTED: hypothetical protein [Vitis vinifera]10092e-107

Swiss-Prot top hits (Blast detail)Scoree value
Q9ZPI1 Lysyl-tRNA synthetase10554e-114
Q6F2U9 Lysyl-tRNA synthetase9883e-106
Q43776 Lysyl-tRNA synthetase8727e-093
P37879 Lysyl-tRNA synthetase7534e-079
Q15046 Lysyl-tRNA synthetase7445e-078

TrEMBL top hits (Blast detail)Scoree value
B9N320 Lysyl-tRNA synthetase9992e-106
B9SY11 Lysyl-tRNA synthetase9921e-105
Q10HI6 Lysyl-tRNA synthetase9884e-105
Q10HI7 Lysyl-tRNA synthetase9884e-105
B6SHH4 Lysyl-tRNA synthetase9786e-104

Arabidopsis top hits (Blast detail)Scoree value
AT3G11710.1 ATKRS-1 (ARABIDOPSIS THALIANA LYSYL-TRNA SYNTHETASE 1); ATP binding / aminoacyl-tRNA ligase/ lysine-tRNA ligase/ nucleic acid binding / nucleotide binding10554e-115
AT3G30805.1 ATP binding / aminoacyl-tRNA ligase/ lysine-tRNA ligase/ nucleotide binding2249e-019
AT3G13490.1 OVA5 (OVULE ABORTION 5); ATP binding / aminoacyl-tRNA ligase/ lysine-tRNA ligase/ nucleic acid binding / nucleotide binding1989e-016

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  22%
 
93  33%
 
124  44%

Unigene MembersMember information