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Information for unigene UN13263
| FASTA Sequence |
| Unigene ID: UN13263 | Length: 1198 |
SSR | | GGTCCCGGTCTTTAAATTAAAGCAATAAAGCTCCATCGTCTTCTCACTCACGGAACTCGTAACCAAGTGAGATCACGTTCTCCCTC
TCTCTCTCTCTCTCTTCGAAAAATTCGAAGCTGAGACGACACAATGGAGACGAGATGTTCTTCCATGGCGGCTGTGTTCTTTTTCG
TGGCGGCTCTAATGGCGTCTTCCTCAATCACAGCAACACCGACACCGTCGTTCGAAGAAAATTTCAATATAATGTGGTCTGAAAAT
CACTTCACGACTTCCGACGATGGACAGATCTGGAATCTGGCCTTAGACAACGATACCGGATGTGGATTTCAGACAAAGCACATGTA
CAGATTTGGATGGTTCAGTATGAAGCTAAAGCTTGTCGGCGGCGACTCAGCCGGCGTCGTTACCGCTTACTACATGTGTTCGGAGA
ATGGAGCCGGACCGGAGAGAGACGAGATAGATTTTGAATTTCTTGGGAACCGAACCGGAGAGCCGTACATCATTCAGACCAATGTG
TTTAAAAACGGAACCGGGAATCGGGAGATGCGACATACTCTCTGGTTCGACCCGACCAAGGACTACCACACCTACTCCATTCTCTG
GAATAACCACCAGCTCGTGTTCTTCGTGGATAGAGTACCGATTCGAGTGTACAAGAACAGCGATAAGGTACCGAACAACGATTTCT
TCCCGAACCAGAAGCCGATGTACTTGTTCTCCAGCATCTGGAACGCTGACGACTGGGCAACACGTGGTGGTCTCGAGAAGACAGAC
TGGAAGAAAGCTCCATTCGTCTCTTCCTACAAGGACTTCGCCGTCGAAGGCTGCCGCTGGAAGGATCCGTTCCCTGCTTGCGTTTC
CACCACAACGGAGAACTGGTGGGACCAGTACGACGCATGGCACTTGTCAAAGACACAGAAGATGGACTATGCGTGGGTGCAACGTA
ACCTTGTCGTATACGATTATTGTCAGGACCGTGAGAGATTCCCTAAAATGCCTTGGGAGTGTTCCATTAGCCCTTGGGCTTAAAAG
CTCAAATTTTGATCTTTCATTTAAAATGTATTAAGTTGAAATGGTTGCTGTAATAATTTTGTACGTTTTTTCTTCTTCTTCATTTC
ATTTCTCATTGATTGTATCATCTGTTATTTGATTGATTATTTAGTCGGCTATGTCCCATAACTTTGCAATATAATTGGCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_563892 xyloglucan:xyloglucosyl transferase [Arabidopsis thaliana] | 1597 | 2e-175 |
| XP_002892650 hypothetical protein ARALYDRAFT_471290 [Arabidopsis lyrata subsp. lyrata] | 1588 | 2e-174 |
| AAM66078 endo-xyloglucan transferase, putative [Arabidopsis thaliana] | 1579 | 3e-173 |
| AAF16642 T23J18.21 [Arabidopsis thaliana] | 1508 | 4e-165 |
| XP_002518528 Xyloglucan endotransglucosylase/hydrolase protein A precursor, putative [Ricinus communis] | 1355 | 2e-147 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8L9A9 Probable xyloglucan endotransglucosylase/hydrolase protein 8 | 1579 | 1e-174 |
| Q9XIW1 Probable xyloglucan endotransglucosylase/hydrolase protein 5 | 760 | 1e-079 |
| Q8LF99 Probable xyloglucan endotransglucosylase/hydrolase protein 6 | 754 | 5e-079 |
| Q41542 Probable xyloglucan endotransglucosylase/hydrolase | 752 | 9e-079 |
| Q8LER3 Probable xyloglucan endotransglucosylase/hydrolase protein 7 | 749 | 2e-078 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WR89 Endo-xyloglucan transferase like protein | 1597 | 1e-175 |
| B9RXQ9 Xyloglucan endotransglucosylase/hydrolase protein A, putative | 1355 | 2e-147 |
| B9H1G2 Predicted protein (Fragment) | 1350 | 6e-147 |
| A9PHP9 Putative uncharacterized protein | 1345 | 2e-146 |
| C0IRH6 Xyloglucan endotransglucosylase/hydrolase 3 | 1332 | 8e-145 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G11545.1 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative | 1598 | 6e-178 |
| AT5G13870.1 EXGT-A4 (ENDOXYLOGLUCAN TRANSFERASE A4); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase | 760 | 9e-081 |
| AT5G65730.1 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative | 755 | 3e-080 |
| AT4G37800.1 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative | 753 | 6e-080 |
| AT2G06850.1 EXGT-A1 (ENDOXYLOGLUCAN TRANSFERASE); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase | 729 | 4e-077 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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