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Information for unigene UN13269

FASTA Sequence
Unigene ID: UN13269Length: 1132 SSR 
GGTTAAAAAGAATTATCTGTTACACAACTTACTATTACAAGTCAGTAAAATGTTTATAAAGATAACAGAAGGAAGGGGGAAAAATA
CAAAAAAAAAAGAGAAGAAGAATTCAAACTTCCCTGCAGATTTTCTAAGTCACCTTCTTCCTCTCAGACAAACAAACAAACAGATT
CCAGCAAAAATTAAAGATAACTAATCATCTGATGGTGACGAACTTGTTAGTTCCATGTCTTGCCCAGTGACTCTTAAGATCGATGG
GGTTCCCAAAGTTAAACCCATCAGAAGCAAGTTTCTCAAGAACCTTCTTAAACGCGCCTTGACTCATCTTCCTCCCAGAGATCCTC
GCTCCACGCCGCTTAGTACTCATTGGCAACGGATGCATCGATATGTTCGTGGTGCAACACGCAGATTGCCAACCGCCGCATCCCCA
ACGGTAGCACTGCTGAGGAGCTCCAGTGCATGTGCAGACCGGGACTGGTAAACCGGAAATGTCCATATTCACTCCGTTAATAACCA
GGTCGAAGCTTTTCTTAGCCGGTTTAACTCGTGAAACATTCGTGTTGTTGTCGTTCTCCTCTTTTGGTTTACGAGGCTTCTTCGCC
TTAGTTGCGCCCCCAGCAGCTTTGGAATTAGGCTTCCGCTTCTTAGTTTCGACAATGTCCGGTTCGCATTTAACCGGGTGTTCCTC
GGTTTGGTGATGATGATGGTGGAGATTCATGTGCATGGATGGGGATGAGGAAGTTTGGGGAAGGACATTTCCGTAATTAGGAGTGG
TTGTGACAGGCAACATGTTGAAGAACTTGTCTTTGTGTTGGTTAATCCAATTGTAGCTCATGTGGGGCTCAGGGTGGTGGTGGTAT
GAACCGGTTTGCCCAATCATTAGATTAGGGTCTCGACCGGGTAGAAACGGTTTAGTGTTCCGATCAATGGTTGGCATTAGCTGCAA
ACCGAGGTTACCTTTGAATGATGTAGCGGCCGCTGGTTCGTAGTAACCCCAATTACGAAACCCATCGTCATCCATCGCACAGATAT
GAGAGATTTGGTTAAACAAACAAGCGGGTTTCTTTAAGGGAATTTTTTTTCCCTTCTGGAGAGAGAGGAGAGAGAAACCTGAGAGA
GAGAGATTGGGGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABC25625 GAGA-binding transcriptional activator [Capsella rubella]12853e-139
XP_002890070 GAGA-binding transcriptional activator [Arabidopsis lyrata subsp. lyrata]12835e-139
ABG57060 GAGA-binding transcriptional activator [Cardamine pratensis]12665e-137
NP_563955 basic pentacysteine 2 [Arabidopsis thaliana]12648e-137
ABC25617 GAGA-binding transcriptional activator [Arabidopsis thaliana]12593e-136

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q2PQR3 GAGA-binding transcriptional activator12852e-139
Q0PWL4 GAGA-binding transcriptional activator12663e-137
Q9LDE2 At1g14680/F10B6_2212646e-137
Q2PQS1 GAGA-binding transcriptional activator12592e-136
Q2PQR7 GAGA-binding transcriptional activator12565e-136

Arabidopsis top hits (Blast detail)Scoree value
AT1G14685.3 BPC2 (BASIC PENTACYSTEINE 2); DNA binding / transcription factor12652e-139
AT1G14685.2 BPC2 (BASIC PENTACYSTEINE 2); DNA binding / transcription factor12652e-139
AT1G14685.1 BPC2 (BASIC PENTACYSTEINE 2); DNA binding / transcription factor12652e-139
AT2G01930.1 BPC1 (BASIC PENTACYSTEINE1); DNA binding / specific transcriptional repressor/ transcription factor10125e-110
AT2G01930.2 BPC1 (BASIC PENTACYSTEINE1); DNA binding / specific transcriptional repressor/ transcription factor10125e-110

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  25%
 
94  50%
 
192  25%

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