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Information for unigene UN13304
| FASTA Sequence |
| Unigene ID: UN13304 | Length: 2245 |
SSR | | AGCACACCCAAAAATAAAGATATATAACAAAGCAAATGTCATGAATATGTCAAGAGCTCATGCACATGGGTGATGACCAAAAACGA
ACACAAACAAAGAGGCAGCAGAAGAAACATTGTGATGTAGTAATAAACGACACGGAATACCATCTTATAAAAATTACATAACCTAT
AAATGTTTCTTCCGGGTCTGGACCACACCGACCAGAACCAAGCAAAACAGTGGGCATATGATGCCGGTTTCACCTGGACCAAGCGA
CAGCGTCGATCTCCGACTGGGCAGCTCGGTACAACTCCAGCCGCTTAGATATGGCGCTGCGTCTCTCCATCACCGCTGGATCTTCG
TTCAAAAGCGACGAGAGCCTCTTCATGTCCATGGTACCGAGCTCGGCAAAGAAGTGGTCGAGGAGGCTGCGCTTGGCTTCTCGGAC
TTGGCAGTAGACGATGGACTTGGGGATTGAATTCCGCAGTCCAGCACATACCATGTTCACATAAGACAGAACATTGGATCCGATTC
TTCTGAGATAGGAATCATTGTAACGGTCGAAAATGGAGTGCGTGGGGTTACCACCCTTCTCAGCATCTTGGGGAAGCTTCCTGAAG
AAATCAACAGTGAGGTAACTGCACTCCATATCCACCAGCTGCAGTGTTGCTTTCTTACTTCCCTCTCGCATTTTGTCCAACGACTC
TATGGCCGCGTTTGTTACCTCCACTCTCAGAGCTGGGTATTGCTTTAATTCCACCGTCTCATTCACAGACTTGTGAACCAGATCCT
TCAATATCGCATGAACAGTGTCAACAGATGCTTCAGCAGGGCCTCGGATGGACACAATAGAAGACTCAATGAGACGACGGTAACCT
TGCTCAGGGGCAATCAAGTGAGGCTGGTAACCATCAGCCTCAGTGACCAGCTTGCGGATGTTGTCCATTGCTAGCTGCTTGTCGAA
CTGAAGTCTCTTCAGAGCGGCCGGAAGCTGGTTATCAAACACGTTATACACCTTTTCACCACCAGCACGCACTCCATCGAGATGGT
CCTTGAATATTTGATCGAAGAGCCGACATATCTCCATTATTGAATACAACTTCCCCCCAGCATCAGCTGCAATAGGCTTTCCAAGG
CGACTAAGTTCAGATTCCAGCTCTAACACTGTTTTGTTAATAAGCGACTGGATGCCTGGAATTCTTGACTTGATCACACGTTCTAG
ATGCTTGGAGAGCATCTTTGCTAAATGCTCGGAACCCATTCTAGGTGCAAGGTGCCTATACTCTGTAGTATTGGAAAAGTACTCCC
TCTCTCTTCTTCGAGCCGCAATCATGTCAACATTCTTGTTAATATCTGCTTGGGAGCGGTTGACAACTCCAACCCATGGATATTTG
AGTTTAAAAGATTTCCCTTCCAAAATTTCCACTGCATCAGTCCCCTTGTCCATAAGATCGATCTTTGTCAAGACACCAAATGTTCT
CTCCCCTGATGGATCAACTTCTCGGGAAATTTTAATTGCGTCTGAGGTAGCCAGATCTTGGTTTGCAGGTGAAATTGCCAAAATAA
TGCAGTTGGGCTTTTCAATGTAAGACCGGACCATGTTTTCAATGTCCTTCACTATATTTTCGGATTGTCCCTCAACAGCAACTTTT
GTAAGACCTGGAAGATCAATCAGTGTCAAGTTGACAACATTGGGAGAGTAGATGCTAAGGTGAATGGGTACACTAGAAATGGCCTT
GCTGCGTCCGGTCTCCCTGTCAGTCTCATCTTGAATCTCCTTCCTCACAGCAGCAAAATCACTGAACTTTTTCCTCGGGAGGTGAA
GGAACTCAGCATACTCACGAGCTCCATCATCAATCTTTTGCAACTGCAAGACAAGGGGCCTTCGTGTAACGATACCAGATCCACGG
GGTAAAAAGTCCTTTCCCACTATGCTCTCCAGAACTGAAGACTTCCCAGAGCTCTGACCACCGACGACGGCGATGGAAGGCAAGGA
ATCCCAGAGAGTAGGTAGGGCGCTAGAGTCTCCATGGTCTCCTAGAGCCGTGCAAGCTCTCTGTATCTTGTTAACCAGAGATATCA
GATTCTCCATCTTTCTCTACTTGCTCTTTTCTCCAAGGCTCCGGTGAGGACGCGGTAGCAGCTAGAACAGATCGGCAAGATCTGAT
GCCTCCGTCGGGAGAATTTTACGCCGGCAGGAATAGATCTGACGGAGCCAGAGAGAGAGAGAGAGAGAGAGAGGAGCAATTGAATT
GAGTCGAGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_851120 dynamin-related protein 1A [Arabidopsis thaliana] | 3014 | 0.0 |
| AAM19784 AT5g42080/MJC20_19 [Arabidopsis thaliana] | 3010 | 0.0 |
| XP_002868561 AT5g42080/MJC20_19 [Arabidopsis lyrata subsp. lyrata] | 3003 | 0.0 |
| XP_002299468 predicted protein [Populus trichocarpa] | 2814 | 0.0 |
| XP_002303654 predicted protein [Populus trichocarpa] | 2795 | 0.0 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P42697 Dynamin-related protein 1A | 3014 | 0.0 |
| Q39828 Dynamin-related protein 5A | 2751 | 3e-310 |
| Q39821 Dynamin-related protein 12A | 2740 | 6e-309 |
| Q84XF3 Dynamin-related protein 1B | 2605 | 3e-293 |
| Q8LF21 Dynamin-related protein 1C | 2176 | 1e-243 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9GL50 Predicted protein | 2814 | 0.0 |
| B9GXJ4 Predicted protein | 2795 | 0.0 |
| B9RCT9 Dynamin, putative | 2781 | 2e-312 |
| A5BCR9 Putative uncharacterized protein | 2727 | 3e-306 |
| B9SBH8 Dynamin, putative | 2717 | 4e-305 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G42080.1 ADL1 (ARABIDOPSIS DYNAMIN-LIKE PROTEIN); GTP binding / GTPase/ protein binding | 3015 | 0.0 |
| AT3G61760.1 ADL1B (ARABIDOPSIS DYNAMIN-LIKE 1B); GTP binding / GTPase | 2606 | 2e-294 |
| AT1G14830.1 ADL1C (ARABIDOPSIS DYNAMIN-LIKE PROTEIN 1C); GTP binding / GTPase | 2176 | 1e-244 |
| AT5G42080.2 ADL1 (ARABIDOPSIS DYNAMIN-LIKE PROTEIN); GTP binding / GTPase/ protein binding | 2107 | 1e-236 |
| AT2G44590.3 ADL1D (ARABIDOPSIS DYNAMIN-RELATED PROTEIN 1D); GTP binding / GTPase | 2097 | 2e-235 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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