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Information for unigene UN13313

FASTA Sequence
Unigene ID: UN13313Length: 923 SSRSNP
GGGTTATTCCTCCGCGGCATCTCTCTCTCTCTCTCTCTCTCTTCCTTATCTTCATCACAAGGCATCACACTCTCTCCACTTCACAA
GCGGAGATTTCTCATTTCTATCGTTTCTCTGATTCTTCAGCTAAAAGCCAAATAGCTTACTTTCTATCTCGATCCTCGAAGTGAAT
CAATATGTCAATGACGGAAGAAACAAAGACGAGTAAGCTCGAATCGGCGGCGGGAGATTCCTCCGATGTGGAAAGTGGTGGTAACT
GTAGCAGTAGCGGAAGTGGAGGCGACACGAAGAAGACTTGCGTTGATTGCGGGACTAACAAGACTCCTCTTTGGCGTGGTGGCCCT
GCTGGTCCTAAATCACTGTGCAATGCGTGTGGGATCAAGAGCAGGAAGAAGAGGCAAGCAGCTCTTGGGATCAGACAAGATGACAA
CAAGATCAAGATCAAGAACAAAAGCAACAACAATCTCGCTACTGATCATCAGACTGTCAAGAACGGAAAAGGAGATGCAGGAAATG
TCAAGAAAAGGATCAAGACAGTGGATGCTGCTGATGATAGTTGCAGCAGTAGAGTATAACAAGAAGAGTTTGGAAAGGGCAAGTCG
ATTTTTGGATATAGGGTTTAAAGTACCGGCGATGAAGAGATCGGTGTTGGAGAAGAAGAGGCTGTGGAGGAAACTCGGTGAAGAGG
AACGAGCAGCTGTACTTCTCATGACTCTTTCTTGTGGTTGAGTTTTGGTTCTCAACTCTCTCTTTTTTTTTGTCTGAGTGGTTTGA
GAGAGATTAGGGAAAATAAGTTAGTAATGAAATGAGGAATGAAGAGATATTTAACATAAATATAAATATGTAATCCTGTCGGAATT
GTTTTCTGTAGCCCGAGCTAATGTTATGCTATTTTACTAGTTAATTATTTCTTCAGTCTAATA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002868160 hypothetical protein ARALYDRAFT_329901 [Arabidopsis lyrata subsp. lyrata]4869e-047
NP_680707 GATA type zinc finger transcription factor family protein [Arabidopsis thaliana]4643e-044
XP_002885174 hypothetical protein ARALYDRAFT_479155 [Arabidopsis lyrata subsp. lyrata]3471e-030
NP_188312 GATA transcription factor 17 [Arabidopsis thaliana]3425e-030
ACU17164 unknown [Glycine max]2394e-018

Swiss-Prot top hits (Blast detail)Scoree value
Q9LIB5 GATA transcription factor 173422e-031
Q8LG10 GATA transcription factor 152241e-017
Q9FJ10 GATA transcription factor 162151e-016
Q8LC79 GATA transcription factor 181721e-011
Q8LC59 GATA transcription factor 231721e-011

TrEMBL top hits (Blast detail)Scoree value
Q8GW81 Putative uncharacterized protein At4g161414642e-044
Q0WPA1 Putative uncharacterized protein At3g168703423e-030
C6T5X2 Putative uncharacterized protein2393e-018
B9MZZ3 Predicted protein2242e-016
B9RZK8 GATA transcription factor, putative2213e-016

Arabidopsis top hits (Blast detail)Scoree value
AT4G16141.1 sequence-specific DNA binding / transcription factor/ zinc ion binding4641e-046
AT3G16870.1 zinc finger (GATA type) family protein3422e-032
AT3G06740.1 zinc finger (GATA type) family protein2249e-019
AT5G49300.1 zinc finger (GATA type) family protein2151e-017
AT3G50870.1 MNP (MONOPOLE); transcription factor1721e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  14%
 
97  50%
 
124  29%
 
61  7%

Unigene MembersMember information