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Information for unigene UN13343
| FASTA Sequence |
| Unigene ID: UN13343 | Length: 884 |
| SNP | GGAAGTCTCTCTTGTGTAACAGAACACCAAAGCTCCTTTTTCTTGAGTCTCCGTTCTTAAACGTCAAGAGTTATGGTGAGAGTCTT
TCTTCTCTACAATCTCTTAAACTCATTTCTTCTCTGTTTGGTTCCCAAGAAGCTTAGAGTTCTCTTCCCTCCTTCTTGGTACACCG
ACGACAAGATCCCACCACCGTCTGAATCGGAATGTTCTTTGAGAACAGAGCCGGTGGATCTTAAACGAGTGTTTCAGATGTTTGAC
AAGAACGGAGACGGCCGCATCACAAAGGAAGAGCTAAATGATTCTTTAGAGAATCTTGGTATCTTCATGCCAGACAAAGATCTGAT
CCAGATGATCCAGAAGATGGATGCAAATGGAGATGGCTGTGTAGACATCAACGAGTTTGAGTCTCTTTACGGTTCGATCGTCGAAG
AGAAAGAGGAAGAGGATATGAGAGATGCGTTCAATGTGTTTGATCAAGACGGTGATGGATTTATTAGCGTTGAAGAGTTAAAGTCT
GTGATGGCTTCCTTGGGACTCAAGCAAGGTAAAACTCTAAAGTGTTGTAAAGAGATGATTACTCAAGTTGATGAAGATGGTGATGG
TAGAGTCAATTACAATGAGTTTCTTCAGATGATGAAGTCTGGTGGGTTTAGCAATAGATCATAATCAGATTAAGCTGATTTGGTCC
CTTTTTACTCTGTAAATAGTTCATTTTTATGCTTTGTTTAATCTTGAGCTGAATTGTTTAAACAACACTCTTTGTTTTTTTCCTAC
AACTCTGAATGGTGCATGCCACGTGACTTTGCCAGCTTGAAACACCAAGTGTTGTAAACAGAACCACACATGTAATGATAGATTGA
TTATTGGACGAAGATGGGTTTATT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_191503 calmodulin-like protein 4 [Arabidopsis thaliana] | 896 | 3e-094 |
| XP_002876503 hypothetical protein ARALYDRAFT_486411 [Arabidopsis lyrata subsp. lyrata] | 893 | 6e-094 |
| NP_565996 calmodulin-like protein 5 [Arabidopsis thaliana] | 762 | 9e-079 |
| XP_002881895 hypothetical protein ARALYDRAFT_903714 [Arabidopsis lyrata subsp. lyrata] | 755 | 6e-078 |
| BAI52955 calcium-binding EF-hand protein [Citrullus lanatus subsp. vulgaris] | 577 | 2e-057 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LX27 Calmodulin-like protein 4 | 905 | 1e-096 |
| O22845 Calmodulin-like protein 5 | 762 | 4e-080 |
| Q9SRR7 Calmodulin-like protein 3 | 548 | 3e-055 |
| Q9LNE7 Calmodulin-like protein 7 | 543 | 1e-054 |
| Q9ZR02 Calmodulin-like protein 6 | 502 | 6e-050 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| D1MWZ5 Calcium-binding EF-hand protein | 577 | 2e-057 |
| Q9SCA1 Calcium-binding protein | 575 | 3e-057 |
| A5BNB3 Putative uncharacterized protein | 564 | 5e-056 |
| C6T4H1 Putative uncharacterized protein | 560 | 2e-055 |
| B9GNH2 Predicted protein (Fragment) | 558 | 3e-055 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G59440.1 calcium-binding protein, putative | 906 | 7e-098 |
| AT2G43290.1 MSS3 (multicopy suppressors of snf4 deficiency in yeast 3); calcium ion binding | 763 | 3e-081 |
| AT3G07490.1 AGD11 (ARF-GAP domain 11); calcium ion binding | 548 | 2e-056 |
| AT1G05990.1 calcium-binding protein, putative | 543 | 9e-056 |
| AT4G03290.1 calcium-binding protein, putative | 502 | 5e-051 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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