Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN13347

FASTA Sequence
Unigene ID: UN13347Length: 809 SSR 
GGGAATCATCATCCTTTCGTCTCTCTCAGAAACCCTAAATCGCTCTTACGTCTCTCTCTCTCTCTCTCTCTCTCTCTCAAGATGCA
AATTTTCGTGAAAACTCTGACCGGCAAGACCATCACCCTCGAGGTCGAGAGCTCCGACACAATTGACAATGTCAAGGCAAAGATCC
AGGATAAGGAGGGGATCCCTCCCGACCAGCAGAGGCTCATCTTCGCTGGGAAGCAGCTAGAAGACGGACGCACCCTGGCCGATTAC
AACATCCAGAAGGAGTCAACTCTCCATCTCGTGCTTCGTCTCCGTGGTGGTATGCAGATTTTCGTCAAGACCCTCACCGGCAAGAC
TATAACCTTGGAGGTTGAGAGCTCTGACACGATCGACAATGTCAAAGCGAAGATCCAGGACAAGGAAGGGATTCCTCCGGACCAGC
AGAGGCTCATCTTCGCTGGGAAACAGCTCGAGGATGGTCGGACTTTGGCGGATTACAACATCCAGAAGGAGTCTACTCTCCACTTG
GTTCTTCGTCTTCGTGGTGGAAGCTTCTGAGCGTTGTGATTGTGTGGTCTCTAAAGTGGTGTTGATGCACTTGGGAGATGATCTCT
GTTTGCTTCTGCAAAAATGGATCTCTGTTTCCCTTTTATGTTTCAAGTTTAAATAATAATCCAAGTGCATTGTGAACCCTAAAATG
GATCCTTTTTATGTTTTCTATCTCAGCTGTTCTTCATTGATTACAGGATTGAGGAATGGATCCTTCTTTTGGATTCGTGTTTTGAA
TTCAAGTTCTTTGAGTGAAGCTTATGTTAATAGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_851029 polyubiquitin 3 [Arabidopsis thaliana]7734e-080
NP_568397 polyubiquitin 4 [Arabidopsis thaliana]7734e-080
AAO43307 putative polyubiquitin [Arabidopsis thaliana]7734e-080
BAF00213 polyubiquitin 4 UBQ4 [Arabidopsis thaliana]7734e-080
ABH08754 ubiquitin [Arabidopsis thaliana]7734e-080

Swiss-Prot top hits (Blast detail)Scoree value
P59263 Ubiquitin3799e-036
P69308 Ubiquitin3799e-036
P69309 Ubiquitin3799e-036
P69310 Ubiquitin3799e-036
P69311 Ubiquitin3799e-036

TrEMBL top hits (Blast detail)Scoree value
A6XIA0 Ubiquitin (Fragment)7733e-080
Q0WRN6 Polyubiquitin 4 UBQ47733e-080
Q1EC66 AT5G03240 protein7733e-080
Q6KFS0 Putative polyubiquitin (Fragment)7733e-080
A1X1E5 Polyubiquitin7706e-080

Arabidopsis top hits (Blast detail)Scoree value
AT5G03240.1 UBQ3 (POLYUBIQUITIN 3); protein binding7741e-082
AT5G20620.1 UBQ4; protein binding7741e-082
AT5G03240.2 UBQ3 (POLYUBIQUITIN 3); protein binding7741e-082
AT5G03240.3 UBQ3 (POLYUBIQUITIN 3); protein binding7741e-082
AT4G05320.2 UBQ10 (POLYUBIQUITIN 10); protein binding7632e-081

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
117  64%
 
104  36%

Unigene MembersMember information