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Information for unigene UN13352
| FASTA Sequence |
| Unigene ID: UN13352 | Length: 921 |
SSR | | GGATGATGATGATGGTGAGGAAGTTGAAAGTGATGATGATGATGATGATGATGGTGACGAAGTTGAAAGTGATGAATCTACGCTTG
TACCCGGTATAGAAGTGCCTGCAAACTTCACTTACCGAGCTACTTCAGATTCCCTAACGATCAATCAGACTCCACAACCTCTTCCT
CCATCCCTTACATTCAAAGCTTGCATCTTGCTGTCAAGAGACAATATTAATCTCGAGGATGATGGAGAGGGTGTTTCTTGGCGCTT
CAGTGATCCCTTTGGTGAAGATGAAGAGAATTTATTGATGTGTGTGTCTTGTAGGTTTGGGGGTAACCAGAATGGCCTCACTCCAA
TATGGATCAGACAAGCGCGGCATGTCTTATCTATATGGATGTGACGACCATCTGTATACATTTGAAGATTCTTTTTATCTAGACCA
GGATTCCTCTGAAGCCGAAGACGCCACTTTCAGCGAGCTTGTGTTTGAGTTCAAACTCTTTTATAAGAAATGGAAGGTGAAAGCTT
GTGGTGTACAACTTTTGGAGGAGAAAGAAGAATCTGGACGTGATGAGGGTGAAGAGGACGAAGTTGGCGATGATGAAAATGATGGG
GTTGAGGAGGAAATAAAGGATGATGTAGATAAAACTCAACAAGGAGAAGAATCTAGACAAGAGTTGATGATGGAGAGACAAGAAGC
AAGAAACGAAGGAGGTTCAGCCTTCCGTAGGTATATGAAATTGTCATGTTGTTATATTTTGTAATTGTGTGCAATTTAATTTTCCA
AGAAGAGAAGCTCAATAAACACCCAGGGACAATCAATCTGGGGATAATTGGACTTTAACAGTAATAGCAAAGTTGCGTTTGTAAGA
AAAATTCCTCTCTCAAGTTATTCGTTCATAACCATATGAAGATGCATGATTGTTGGTTTGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ACP30622 disease resistance protein [Brassica rapa subsp. pekinensis] | 259 | 2e-020 |
| ACP30623 disease resistance protein [Brassica rapa subsp. pekinensis] | 235 | 1e-017 |
| ACP30604 disease resistance protein [Brassica rapa subsp. pekinensis] | 185 | 8e-012 |
| ACP30603 disease resistance protein [Brassica rapa subsp. pekinensis] | 175 | 1e-010 |
| NP_197336 TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana] | 166 | 1e-009 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| D1GEI0 Disease resistance protein | 259 | 1e-020 |
| D1GEI1 Disease resistance protein | 235 | 8e-018 |
| D1GEG2 Disease resistance protein | 185 | 5e-012 |
| D1GEG1 Disease resistance protein | 175 | 8e-011 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G18350.1 ATP binding / nucleoside-triphosphatase/ nucleotide binding / protein binding / transmembrane receptor | 166 | 5e-012 |
| AT5G11250.1 disease resistance protein (TIR-NBS-LRR class), putative | 126 | 2e-007 |
| AT5G38340.1 disease resistance protein (TIR-NBS-LRR class), putative | 124 | 4e-007 |
| AT5G38350.1 disease resistance protein (NBS-LRR class), putative | 122 | 6e-007 |
| AT3G10810.1 zinc finger (C3HC4-type RING finger) family protein | 118 | 2e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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