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Information for unigene UN13365

FASTA Sequence
Unigene ID: UN13365Length: 779  SNP
GCGCTTAAACTAAACCCATATACCACTCGTCAAATAAATCCTTAATAAATAAACACAGAAGGTAATGAGGAGATATAGCATCCCAA
CTGATATTATCCGACCATACAACTGACCTAAACACGAAACAAGTAGCAAATGAGGTTCTTAGTATTACAAAACACACAAAGCATAA
CCATTTTTCTTTTAAGTTTAAGGTCACACTTAAATTCCTAATCCCATCCTCAAATATGAGTCAGTCAAATAGCAATAACTAGAAAG
CCTCCTTAATCATCGTCTTCTTCCTCCTCTTCGCTTCCTCCTCCAGCTTCGTCCACTTCAGACCTGGACTCATCATCTTCACCTCT
ACTGGTTCCATTAGCCAGTTTCATGTTGTACTGTTGCATACTCTTATTATATTCACTCTTCCTGGTCTCTGCCTTGGAAGCATAAG
GAGCTTTCTCTTCTTCACTCATAGACTTCCACTTCTCTCCAGCAGCCTTACCAACGGCGGCGACGGACTTGTTGTTAGGGTTCGCC
TCTTTGAACTCCCGTCGAAAATCATCTAGGAAGACGAAGAAAGCGCTTGGAGGTCTCTTTGGTTTGTTTGGGTCCTTCGTCGCCGT
CTTCTTCTTCCTTCCTCTTGTTTTCAGTCTCTGGTCGGTGCTGGTCGCTTCAGCTTTCGATTGGCCGCCTTTCATCTCGTGTTCTT
TGGTTTGTTTTTTTTTTTTGTTTGACCAGTCGAATCTGTGAGCGATTAGTTCTTTTACTTTTTAAGTATTTGTCTTTTCACGCAGT
ACTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002886121 hypothetical protein ARALYDRAFT_480649 [Arabidopsis lyrata subsp. lyrata]5297e-052
AAM64404 putative HMG protein [Arabidopsis thaliana]5144e-050
NP_179347 high mobility group B4 protein [Arabidopsis thaliana]5127e-050
CAA74403 HMG protein [Arabidopsis thaliana]5082e-049
AAK43965 putative HMG protein [Arabidopsis thaliana]5046e-049

Swiss-Prot top hits (Blast detail)Scoree value
P40619 HMG1/2-like protein3887e-037
P26585 HMG1/2-like protein3815e-036
P40620 HMG1/2-like protein3611e-033
P27347 DNA-binding protein MNB1B3511e-032
P40621 HMG1/2-like protein3214e-029

TrEMBL top hits (Blast detail)Scoree value
Q8LCY0 Putative HMG protein5143e-050
Q42344 HMG1-like protein5125e-050
O49598 HMG protein5081e-049
Q94K96 Putative HMG protein5044e-049
B9DG70 AT2G17560 protein4874e-047

Arabidopsis top hits (Blast detail)Scoree value
AT2G17560.1 HMGB4 (HIGH MOBILITY GROUP B 4); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor5132e-052
AT2G17560.2 HMGB4 (HIGH MOBILITY GROUP B 4); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor5132e-052
AT2G17560.3 HMGB4 (HIGH MOBILITY GROUP B 4); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor4918e-050
AT4G35570.1 HMGB5 (HIGH MOBILITY GROUP B 5); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor3976e-039
AT1G20696.1 HMGB3 (HIGH MOBILITY GROUP B 3); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor3941e-038

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  15%
 
106  46%
 
63  23%
 
122  15%

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