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Information for unigene UN13367
FASTA Sequence |
Unigene ID: UN13367 | Length: 1046 |
| SNP | ATGAAACAGATTTCCTTCACAATGCGTATAAAGAGAATAAGTCACTTCCACTAAATGTAGTGGAGAAGTAAACATAATAATGATAG
GTTCTATTGGGTCAATGATGTACATCCAATATAATTGACAAAGAAACAAATTTTAATGGACAAAAACAAAGTAGAACAAGATCAAT
AGAGAGTTAACAGCTATCCCTCGTAAGTTGAAATGGTAGATGATGCGGAGAAGCTGCTGATAGCTGTTATGTGGGAGAAGCTAAGG
CGAGTTTTAGGATGAAACCAATGATGAGTCCAATGAGTCCAACCATAGCTGCCAACTTTAAGGATAACCCATTTTCGCTATTCCTT
TTTCGTTTCTTCAACGTCTCCAATTCATGTTGCAGCTGTTGTGTTTGCTTAACAGCTGCATCTCGCTCTTCCTTCAGCCGCTGTAT
AGTAGACACTGAGATGGATTCGGAGCCATTTCCATCGCCACTGGTTGCTCCAGATTCAGAGGGTTTTTGCGGTGTAGATGTGGCGA
TATACGAGACCTTGAGCTTACACTCTGTTAATGTTTTGCTACTGTCCTTGGTAAAAGTGTCTGGAGGAAGGTCATCAACATCAGTG
TGAGGAGGGACAATGGTACTTTGAAGGAGAAACTTGTCTTTGCACTGCATATCTGGAGGATACTCCCTTTGTGCTTGTAGTGTAAC
TCTAATGATGCAGGAGTCCCATGGCTGAATGACACCAGTGTTGGGCCTTACAAAATACTTTTTTGGAGATGTTGTTTTCACCTTGA
AAGCAACATAGTTCTCGGTTTTATTGGAAACTTTAAGATCACAGTAGCTTTGCTTTTCGAGTTCAAAAAGGAATTTGAGTTCATCA
GGTTGAATGGAGATAAGCTGATTCTCTCCAACGCCACTCATTTCTCCTTTAGCTGGGGGGAAAAGGAGAACAAAAGTCAAAAGGTG
TAACGGTGGATCAGCGAAGAAGGTGCTTATTTCTCTTCTTCTCTTTCCCCCTGGAATCGCTCTCCACCACAACCACTCCTCTTTGT
TCGATTGGTGGTCC
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GenBank top hits (Blast detail) | Score | e value |
NP_199529 VAMP (vesicle-associated membrane protein) family protein [Arabidopsis thaliana] | 995 | 1e-105 |
XP_002863353 vesicle-associated membrane family protein [Arabidopsis lyrata subsp. lyrata] | 991 | 3e-105 |
ABD64916 vesicle-associated membrane protein, putative [Brassica oleracea] | 944 | 9e-100 |
ABD65040 vesicle-associated membrane protein, putative [Brassica oleracea] | 880 | 2e-092 |
XP_002531789 vesicle-associated membrane protein, putative [Ricinus communis] | 750 | 3e-077 |
Swiss-Prot top hits (Blast detail) | Score | e value |
A2VDZ9 Vesicle-associated membrane protein-associated protein B | 189 | 1e-013 |
O95292 Vesicle-associated membrane protein-associated protein B/C | 188 | 2e-013 |
Q9QY76 Vesicle-associated membrane protein-associated protein B | 188 | 2e-013 |
Q9Z269 Vesicle-associated membrane protein-associated protein B | 183 | 7e-013 |
A5GFS8 Vesicle-associated membrane protein-associated protein B | 181 | 1e-012 |
TrEMBL top hits (Blast detail) | Score | e value |
Q9LVU1 Putative VAMP (Vesicle-associated membrane protein)-associated protein | 995 | 8e-106 |
Q2A9V5 Vesicle-associated membrane protein, putative | 944 | 6e-100 |
Q2A9M0 Vesicle-associated membrane protein, putative | 880 | 2e-092 |
B9T0M0 Vesicle-associated membrane protein, putative | 750 | 2e-077 |
B9GYP5 Predicted protein | 719 | 8e-074 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT5G47180.1 vesicle-associated membrane family protein / VAMP family protein | 996 | 3e-108 |
AT5G47180.2 vesicle-associated membrane family protein / VAMP family protein | 996 | 3e-108 |
AT3G60600.1 VAP (VESICLE ASSOCIATED PROTEIN); protein binding | 384 | 3e-037 |
AT3G60600.2 VAP (VESICLE ASSOCIATED PROTEIN); protein binding | 384 | 3e-037 |
AT3G60600.3 VAP (VESICLE ASSOCIATED PROTEIN); protein binding | 384 | 3e-037 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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