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Information for unigene UN13367

FASTA Sequence
Unigene ID: UN13367Length: 1046  SNP
ATGAAACAGATTTCCTTCACAATGCGTATAAAGAGAATAAGTCACTTCCACTAAATGTAGTGGAGAAGTAAACATAATAATGATAG
GTTCTATTGGGTCAATGATGTACATCCAATATAATTGACAAAGAAACAAATTTTAATGGACAAAAACAAAGTAGAACAAGATCAAT
AGAGAGTTAACAGCTATCCCTCGTAAGTTGAAATGGTAGATGATGCGGAGAAGCTGCTGATAGCTGTTATGTGGGAGAAGCTAAGG
CGAGTTTTAGGATGAAACCAATGATGAGTCCAATGAGTCCAACCATAGCTGCCAACTTTAAGGATAACCCATTTTCGCTATTCCTT
TTTCGTTTCTTCAACGTCTCCAATTCATGTTGCAGCTGTTGTGTTTGCTTAACAGCTGCATCTCGCTCTTCCTTCAGCCGCTGTAT
AGTAGACACTGAGATGGATTCGGAGCCATTTCCATCGCCACTGGTTGCTCCAGATTCAGAGGGTTTTTGCGGTGTAGATGTGGCGA
TATACGAGACCTTGAGCTTACACTCTGTTAATGTTTTGCTACTGTCCTTGGTAAAAGTGTCTGGAGGAAGGTCATCAACATCAGTG
TGAGGAGGGACAATGGTACTTTGAAGGAGAAACTTGTCTTTGCACTGCATATCTGGAGGATACTCCCTTTGTGCTTGTAGTGTAAC
TCTAATGATGCAGGAGTCCCATGGCTGAATGACACCAGTGTTGGGCCTTACAAAATACTTTTTTGGAGATGTTGTTTTCACCTTGA
AAGCAACATAGTTCTCGGTTTTATTGGAAACTTTAAGATCACAGTAGCTTTGCTTTTCGAGTTCAAAAAGGAATTTGAGTTCATCA
GGTTGAATGGAGATAAGCTGATTCTCTCCAACGCCACTCATTTCTCCTTTAGCTGGGGGGAAAAGGAGAACAAAAGTCAAAAGGTG
TAACGGTGGATCAGCGAAGAAGGTGCTTATTTCTCTTCTTCTCTTTCCCCCTGGAATCGCTCTCCACCACAACCACTCCTCTTTGT
TCGATTGGTGGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_199529 VAMP (vesicle-associated membrane protein) family protein [Arabidopsis thaliana]9951e-105
XP_002863353 vesicle-associated membrane family protein [Arabidopsis lyrata subsp. lyrata]9913e-105
ABD64916 vesicle-associated membrane protein, putative [Brassica oleracea]9449e-100
ABD65040 vesicle-associated membrane protein, putative [Brassica oleracea]8802e-092
XP_002531789 vesicle-associated membrane protein, putative [Ricinus communis]7503e-077

Swiss-Prot top hits (Blast detail)Scoree value
A2VDZ9 Vesicle-associated membrane protein-associated protein B1891e-013
O95292 Vesicle-associated membrane protein-associated protein B/C1882e-013
Q9QY76 Vesicle-associated membrane protein-associated protein B1882e-013
Q9Z269 Vesicle-associated membrane protein-associated protein B1837e-013
A5GFS8 Vesicle-associated membrane protein-associated protein B1811e-012

TrEMBL top hits (Blast detail)Scoree value
Q9LVU1 Putative VAMP (Vesicle-associated membrane protein)-associated protein9958e-106
Q2A9V5 Vesicle-associated membrane protein, putative9446e-100
Q2A9M0 Vesicle-associated membrane protein, putative8802e-092
B9T0M0 Vesicle-associated membrane protein, putative7502e-077
B9GYP5 Predicted protein7198e-074

Arabidopsis top hits (Blast detail)Scoree value
AT5G47180.1 vesicle-associated membrane family protein / VAMP family protein9963e-108
AT5G47180.2 vesicle-associated membrane family protein / VAMP family protein9963e-108
AT3G60600.1 VAP (VESICLE ASSOCIATED PROTEIN); protein binding3843e-037
AT3G60600.2 VAP (VESICLE ASSOCIATED PROTEIN); protein binding3843e-037
AT3G60600.3 VAP (VESICLE ASSOCIATED PROTEIN); protein binding3843e-037

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
96  60%
 
62  20%
 
82  20%

Unigene MembersMember information