RadishBase

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Information for unigene UN13377

FASTA Sequence

Unigene ID:UN13377

Length: 939

GCTCGAAATGGAAACTTTAAATGGAATAAAGAGAAGACCACATCTCTAAAAAAAAGTATAAGCATAACAAACATGATTACTTTTGA
ATCGAGATGGAACAAAGATACATACAATAAGACATAAACACAATCTTATGTTTCACCACTCAAACTACGTAATCAAAAGTATAAAA
CAACTTTGAACTCATCTTCACGAGTCCATGGAACCACACCATCCATCGAGTATTATGTCGATGTCATATATTTAAATTATGAACCG
CTGCTGCCTCATTCGCTTGATACATTTCCATATTGCCAAGGATTAAACTCGATCGATTTGAGGTCCACTTCACTGCTCGAGCTCGG
TGCTGTATCTCGGTGTTCATTGTACTTCCCGTTGTATTGGTATATCTCAATATCTCCCCATGGCGTAAATGTGATCTCATCCGTTA
GATCGAACCATCTTGGTGTGAACTTCTGTCCCTTTGTCTCTCGTGTCCTCTTTTCTGCCCTTTGTCTCTCCTCAAGGCTGTGCTTC
TCGGAACCAGCTTTAGAAAGGTCACCCTGCTCAAGGGCATATCTATCGGGACGGAGACGTGAGTCTGAAGCCAAGAGCTTGGAAGG
AGCTGTGTCGAAGCTGTTTATCTTGTGAGCAAAGTGCGTGTACTGAAACTTGTCATTCTTGGGAACATCAGCCACATGCCACACCT
CTTTAAGCTCAGTGCCAGGAAGGGGTTCTCCCTCAGTATCACAAGGTTGGTAGCCGATTTTCTCATTCCATTTTCCCGTCATCATG
ATCTTAGGTTCTTCGTCTGCGCTGTAAACGTATCCATCCACTTCATAGCGACCAGAACCGAACCAACCACATGGTTGGAAATAAAG
AACAACTTTGTCTCCGGTGGTTAGATTAGTCATGACCATTTCTCCTGGTGAGTCAACCCAAGTTCGTCCAAATATCAGC

Annotation(GO term)

GenBank top hits (Blast detail)	Score	E value
BAA97478 oxysterol-binding protein [Arabidopsis thaliana]	1142	8e-123
NP_200750 oxysterol binding protein-related protein 3C [Arabidopsis thaliana]	1142	8e-123
XP_002864633 oxysterol-binding family protein [Arabidopsis lyrata subsp. lyrata]	1141	1e-122
ACU21233 unknown [Glycine max]	1042	3e-111
XP_002283434 PREDICTED: similar to oxysterol-binding family protein [Vitis vinifera]	1016	3e-108

Swiss-Prot top hits (Blast detail)	Score	E value
Q54QP6 Oxysterol-binding protein 8	304	5e-027
O13944 Oxysterol-binding protein homolog C23H4.01c	192	5e-014
P35845 Oxysterol-binding protein homolog 1	175	5e-012
Q8K4M9 Oxysterol-binding protein-related protein 1	157	6e-010
Q9BXW6 Oxysterol-binding protein-related protein 1	156	8e-010

TrEMBL top hits (Blast detail)	Score	E value
Q93Y40 Oxysterol-binding protein	1142	6e-123
Q9LTI7 Oxysterol-binding protein	1142	6e-123
C6THD1 Putative uncharacterized protein	1042	2e-111
Q9SR33 Putative oxysterol-binding protein	1003	8e-107
Q9LZM1 Putative oxysterol-binding protein	984	1e-104

Arabidopsis top hits (Blast detail)	Score	E value
AT5G59420.1 ORP3C (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 3C); oxysterol binding	1143	3e-125
AT3G09300.1 ORP3B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 3B); oxysterol binding	1003	4e-109
AT5G02100.1 UNE18 (UNFERTILIZED EMBRYO SAC 18); oxysterol binding / sterol binding	984	7e-107
AT4G12460.1 ORP2B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 2B); oxysterol binding	174	6e-013
AT4G12460.2 ORP2B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 2B); oxysterol binding	169	2e-012

EST library breakdown for ESTs in the assembly


9	4			33%


6	2			17%


8	1			8%


11	3			25%


7	2			17%

Unigene Members