Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN13377

FASTA Sequence
Unigene ID: UN13377Length: 939  SNP
GCTCGAAATGGAAACTTTAAATGGAATAAAGAGAAGACCACATCTCTAAAAAAAAGTATAAGCATAACAAACATGATTACTTTTGA
ATCGAGATGGAACAAAGATACATACAATAAGACATAAACACAATCTTATGTTTCACCACTCAAACTACGTAATCAAAAGTATAAAA
CAACTTTGAACTCATCTTCACGAGTCCATGGAACCACACCATCCATCGAGTATTATGTCGATGTCATATATTTAAATTATGAACCG
CTGCTGCCTCATTCGCTTGATACATTTCCATATTGCCAAGGATTAAACTCGATCGATTTGAGGTCCACTTCACTGCTCGAGCTCGG
TGCTGTATCTCGGTGTTCATTGTACTTCCCGTTGTATTGGTATATCTCAATATCTCCCCATGGCGTAAATGTGATCTCATCCGTTA
GATCGAACCATCTTGGTGTGAACTTCTGTCCCTTTGTCTCTCGTGTCCTCTTTTCTGCCCTTTGTCTCTCCTCAAGGCTGTGCTTC
TCGGAACCAGCTTTAGAAAGGTCACCCTGCTCAAGGGCATATCTATCGGGACGGAGACGTGAGTCTGAAGCCAAGAGCTTGGAAGG
AGCTGTGTCGAAGCTGTTTATCTTGTGAGCAAAGTGCGTGTACTGAAACTTGTCATTCTTGGGAACATCAGCCACATGCCACACCT
CTTTAAGCTCAGTGCCAGGAAGGGGTTCTCCCTCAGTATCACAAGGTTGGTAGCCGATTTTCTCATTCCATTTTCCCGTCATCATG
ATCTTAGGTTCTTCGTCTGCGCTGTAAACGTATCCATCCACTTCATAGCGACCAGAACCGAACCAACCACATGGTTGGAAATAAAG
AACAACTTTGTCTCCGGTGGTTAGATTAGTCATGACCATTTCTCCTGGTGAGTCAACCCAAGTTCGTCCAAATATCAGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAA97478 oxysterol-binding protein [Arabidopsis thaliana]11428e-123
NP_200750 oxysterol binding protein-related protein 3C [Arabidopsis thaliana]11428e-123
XP_002864633 oxysterol-binding family protein [Arabidopsis lyrata subsp. lyrata]11411e-122
ACU21233 unknown [Glycine max]10423e-111
XP_002283434 PREDICTED: similar to oxysterol-binding family protein [Vitis vinifera]10163e-108

Swiss-Prot top hits (Blast detail)Scoree value
Q54QP6 Oxysterol-binding protein 83045e-027
O13944 Oxysterol-binding protein homolog C23H4.01c1925e-014
P35845 Oxysterol-binding protein homolog 11755e-012
Q8K4M9 Oxysterol-binding protein-related protein 11576e-010
Q9BXW6 Oxysterol-binding protein-related protein 11568e-010

TrEMBL top hits (Blast detail)Scoree value
Q93Y40 Oxysterol-binding protein11426e-123
Q9LTI7 Oxysterol-binding protein11426e-123
C6THD1 Putative uncharacterized protein10422e-111
Q9SR33 Putative oxysterol-binding protein10038e-107
Q9LZM1 Putative oxysterol-binding protein9841e-104

Arabidopsis top hits (Blast detail)Scoree value
AT5G59420.1 ORP3C (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 3C); oxysterol binding11433e-125
AT3G09300.1 ORP3B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 3B); oxysterol binding10034e-109
AT5G02100.1 UNE18 (UNFERTILIZED EMBRYO SAC 18); oxysterol binding / sterol binding9847e-107
AT4G12460.1 ORP2B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 2B); oxysterol binding1746e-013
AT4G12460.2 ORP2B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 2B); oxysterol binding1692e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
94  33%
 
62  17%
 
81  8%
 
113  25%
 
72  17%

Unigene MembersMember information