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Information for unigene UN13382
| FASTA Sequence |
| Unigene ID: UN13382 | Length: 1447 |
SSR | | AGAGTTTTAGAAAAGAAAGAAACCATCTTTGATTTGAATAGAATACAATACCACACACTCCTCTTTTTTTTATCCAAAAAGTCGGC
AAATCATTGTTTTGTTTGATTGATTCTCTGGGAACTGATTGAGCAGAGGAGGGGAGATTAATGGGTGATCATCATCATCATCATCG
CATCATCAGAGTCTACTACTTAGCCTTTGCTATCTTACTTTTACTTTTAGGGGAGGGAAATGCATTTGGAGCAGACAATCTTTCTA
ATCAGAAGCTGACCTCACCAATTCTCCAGGATGAGATTGTGAAGCAAGTCAATGAGAATCCAAAGGCTGGATGGAAAGCTGCTTTT
AATGATCGCTTTGCTAACTCCACCGTTGCAGAGTTTAAGCGCCTCCTCGGTGTTAAACCATCACCTAAGAACGCATTCTTAGGTGT
ACCTGTTGTAAGCCATGACATCTCCATCTCTCTCAAGCTTCCTAAACAATTTGACGCTAGAACCGCTTGGTCTCAGTGCTCCAGTA
TTGGAAGGATCCTAGATCAGGGTCACTGTGGTTCTTGCTGGGCATTTGGGGCTGTAGAATCATTGTCTGACAGGTTCTGCATCAAA
TATAACATGAATATTTCTTTATCAGTCAATGATCTCTTAGCATGTTGTGGATTCCTTTGCGGTCAAGGCTGTAATGGTGGCTACCC
TATTTCCGCCTGGCGATACTTTAAGCACCACGGTGTAGTCACCGAAGAGTGTGATCCATACTTTGACAATACTGGATGCTCACACC
CGGGATGCGAACCCGCATACCCTACACCAAAATGTGTGAGGAAATGTGTTAGTGGAAACCAGCTTTGGCGTGAATCAAAACACTAT
GGTGTTAGCGCCTACAAAGTCAGGCATGACCCTCAAGACATTATGGCTGAAGTTTACACAAACGGACCTGTTGAGGTTGCCTTTAC
CGTTTACGAGGACTTTGCGCATTACAAATCTGGAGTGTACAAGCACATAACAGGTGCTAACATTGGAGGTCATGCTGTCAAGCTTA
TTGGCTGGGGAACTTCTGATGATGGCGAAGACTATTGGTTGCTTGCAAATCAATGGAACCGAAGCTGGGGTGATGATGGTTACTTC
AAGATCAAGAGAGGAACGAACGAATGTGGAATCGAACACGGTGTTGTAGCCGGTTTGCCTTCAGACAGGAACGTCTTTAGAGGTGT
AAATACTTCCGATGATGTTCTAGTTTCCTCATTTTAAAACTACAAAATGAGAAAACAAAAGACGTGTCTCGACTCTCTCTCTCTCT
CTCTCTGTAATATAATGTAATTTGCTTCTTGTTTCCAGTGAAAAGAATCAAAAAGATTCTAATAAACCCAAACAAAAGTATATTAA
CTACAATTAATACCATTTAGCTTTTGTTCATGCTCAGTTTTACATATTAATTTATACTGTTTTCATTCTGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002889395 hypothetical protein ARALYDRAFT_887368 [Arabidopsis lyrata subsp. lyrata] | 1708 | 4e-188 |
| NP_563648 putative cathepsin B-like cysteine protease [Arabidopsis thaliana] | 1694 | 2e-186 |
| XP_002889394 hypothetical protein ARALYDRAFT_887367 [Arabidopsis lyrata subsp. lyrata] | 1639 | 4e-180 |
| AAC24376 cathepsin B-like cysteine proteinase [Arabidopsis thaliana] | 1548 | 1e-169 |
| BAH20325 AT1G02305 [Arabidopsis thaliana] | 1527 | 4e-167 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q93VC9 At1g02300/T6A9_10 | 1694 | 1e-186 |
| O23681 Cathepsin B-like cysteine proteinase | 1548 | 9e-170 |
| B9DHV8 AT1G02305 protein (Fragment) | 1527 | 2e-167 |
| Q94K85 Cathepsin B-like cysteine protease | 1493 | 2e-163 |
| Q9ZSI0 Cathepsin B-like cysteine protease | 1479 | 9e-162 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G02305.1 cathepsin B-like cysteine protease, putative | 1695 | 4e-189 |
| AT4G01610.1 cathepsin B-like cysteine protease, putative | 1493 | 1e-165 |
| AT4G01610.2 cathepsin B-like cysteine protease, putative | 1479 | 5e-164 |
| AT1G02300.1 cathepsin B-like cysteine protease, putative | 1167 | 7e-128 |
| AT3G45310.1 cysteine proteinase, putative | 185 | 5e-014 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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