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Information for unigene UN13390

FASTA Sequence
Unigene ID: UN13390Length: 1284 SSR 
TTCCCAGAACCAGATTCATCCCACAAAGTGAATCCGCTTGCTGCAGCAGCAGCAGCAGCGTACGAGCTGCTATTAGAGTTCGAATT
CTCCTCCACAACGTTTCTCTCATTACCACCACCCGCTTGTTGTGCAGCAGCAGAGAACATCATCGGTGGTGAAAGCTCCGGCTTAG
GAATCCTCTGCTGGTTATGAAAATAAGGAATAGGACTTATCGTGTAGGTTCCCATTCCACCGGGGAGCACGTGTTGCAGCGGCGGA
GGAGGTGCAGGCGGAGGTGGCTTCTCAGAGGCTATCCTGGTTGTGTCAATCCTACTTGTCTCTTCTTTAGCACCAACACATTCTAA
CGGTTGTAGAAAATCATGGGTTTTCAAGTGGCTACCTTGAGGAGAAGGTGCAGTGGTAGGCTTTGGATCTGGCTGGAGAGTTGGAG
GATGACTGCAGAGCGATAAAAAATCATGTATTGGTTTTCTCCCTTGGGTTTTGAAGGGACGAGGTTGAGGAAGCTCCATGAACAAC
AACAACAACAACAGCTTCGATGGTTCTTTAAATCTCTTTTTCAAAAAAAACAACTCTCTGCGCGGGGAATTGTCGACGTTTACTTG
CGAAATTGACGTGAATTCTCTAATATTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACAAATTCTCTCATCATCGAGCT
CCCAAATTTCGCATAGCGAAGAGTAGGATAGAATGGCAACAGCATCAAGGTTCCAAGCATTCTTGAACAGTCCGGTTGGCCCTAAA
ACAACCCATTTCTGGGGTCCTATCGCTAACTGGGGTTTTGTTGCTGCTGGTTTGGTGGATATGCAAAAGCCTCCAGAAATGATATC
TGGAAACATGTCCTCAGCCATGTGTATTTACTCTGCACTGTTCATGAGGTTTGCCTGGATGGTGCAACCACGCAACTATCTACTGC
TTGCCTGCCATGCTTCCAATGAGACTGTTCAGCTCTATCAACTCTCTCGTTGGGCTCGAGCCCAGGGGTATCTATCCTCCACGAAA
GAAGAAGAGAAACCGTCTCAGTAAAACAAAATGAGGAAGGAAAAGTCTTTAATTCTGATTCTGATCAGCATTTGTTCTTTTGGAAT
TATTGAACTCCATCCGTTTGATTTCCCTCGAAACATGTTTATGTAGATTGTTGTTTTACTTGTTGGATCTTTCATTGACGTTATCT
CTTTGGTTTTCATAAGTAAAACTTGTTGGAGCCAGTAGTCCGCATTTCCTGCTACTGCCAACACAAATTGCTCTTGAAGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002873981 hypothetical protein ARALYDRAFT_488911 [Arabidopsis lyrata subsp. lyrata]5676e-056
NP_197509 uncharacterized protein [Arabidopsis thaliana]5668e-056
NP_001119254 uncharacterized protein [Arabidopsis thaliana]5076e-049
XP_002318712 predicted protein [Populus trichocarpa]5068e-049
XP_002283422 PREDICTED: hypothetical protein [Vitis vinifera]4951e-047

Swiss-Prot top hits (Blast detail)Scoree value
Q9LEZ3 Transcription factor BIM16929e-072
Q3ZCG2 Brain protein 44-like protein2618e-022
Q9Y5U8 Brain protein 44-like protein2591e-021
P63030 Brain protein 44-like protein2554e-021
P63031 Brain protein 44-like protein2554e-021

TrEMBL top hits (Blast detail)Scoree value
Q949R9 Putative uncharacterized protein5666e-056
B3H6E6 Uncharacterized protein At5g20090.35074e-049
B9I3N6 Predicted protein5065e-049
A5AH05 Putative uncharacterized protein4951e-047
Q5XLE2 Brain protein 44-like4823e-046

Arabidopsis top hits (Blast detail)Scoree value
AT5G08130.2 BIM1; DNA binding / protein binding / transcription factor6928e-073
AT5G20090.1 unknown protein5672e-058
AT5G20090.2 unknown protein5672e-058
AT5G20090.3 unknown protein5072e-051
AT4G14695.1 unknown protein1757e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  40%
 
93  60%

Unigene MembersMember information