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Information for unigene UN13393
| FASTA Sequence |
| Unigene ID: UN13393 | Length: 1042 |
| SNP | ACTAAGAGTCTCTTACATAAACATCAAATCCCAACAACTGATCTACTATAAAACCCCACCTTGAGAAAAATAATCCAAAACAATGT
ACTCTTCATCGTCTGTATCAAAATGCGTCATTTTGATCCATGTCTTCGCCATGCAACTTCTCCTTATAAACAGCGAATTGCCCTTA
AACACGACCAATGCGTATCTCAACCACAAATGCGTGGTTAGTCAAGGAAAATACAAGCCTGGAAGTAAGTACGAGAAACAGTTAAA
ATTGACCATCAAAAATTTTTATTCTAGCAGTGAAAATAAAGAAGGTTTAGACCTTTTAGGCGGTGACGGTTTTTCCGCTATCCTCC
AGTGCCGCGGCGACTCCTACGGGCGCAAGTGCCGCGACTGCTATGCCACCGCCGTCGCTGCGCTTCATAGGAAATGTCCGTGGTAC
AAGGCGAAAATAATATGGTATGACCAATGTCTTCTCTCGTTTGATACAAAATATTCTACTGGGATGATCGACTACGACAATAATTT
TTGTATGTCAAACGCTAAGAAGTTGGGAGGAGATAAACTCTCGTTTATGAGGACTTGGAATACTTTCATGGACAATCTGATGGCTT
TAGCCACCCGTGCTGATAATGACACAACATATCCACCATTGTACTCTGTGGGGAAGACGAGGTTCAACGGTGATACGATGTATGGA
ATGGTGCAGTGTACAAAAGACATACCCCCTAAAGCTTGTAAGGAGTGTCTGGTGTTTTATAGCATTCATTTTCAAGATTGCTTGAA
TGATAAACGAGGAGCGAGATTTATGAGTAGAAGCTGTACTTTTAGGTTTGAGTTTTACCCTTTTATTGCCAAGCAGGTCAGGAATA
TTTTAAGAGTCAAATAAATATTTATTTTTTTTTTAAATATTTTCAGTCAGAAGTTTATGTAACATCAAGTGCAACTCTTTTTTTTG
ATGAATGTTTGAAGAATAAAACAACAAAATAATGACTGAATAAGAGAATGCTCGTCTATTTTGTTGCTTTCTGCTTTAATAAAATG
TATTCTCTCG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_188829 putative cysteine-rich repeat secretory protein 17 [Arabidopsis thaliana] | 671 | 4e-068 |
| Q9LRL9 RecName: Full=Putative cysteine-rich repeat secretory protein 20; Flags: Precursor | 569 | 3e-056 |
| Q9LRL4 RecName: Full=Putative cysteine-rich repeat secretory protein 24; Flags: Precursor | 510 | 2e-049 |
| XP_002877153 hypothetical protein ARALYDRAFT_322981 [Arabidopsis lyrata subsp. lyrata] | 508 | 3e-049 |
| Q9LJW1 RecName: Full=Putative cysteine-rich repeat secretory protein 14; Flags: Precursor | 502 | 2e-048 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LRM2 Putative cysteine-rich repeat secretory protein 17 | 671 | 2e-069 |
| Q9LRL9 Putative cysteine-rich repeat secretory protein 20 | 569 | 1e-057 |
| Q9LRM3 Putative cysteine-rich repeat secretory protein 16 | 563 | 6e-057 |
| Q9LRL4 Putative cysteine-rich repeat secretory protein 24 | 510 | 8e-051 |
| Q9LJW1 Putative cysteine-rich repeat secretory protein 14 | 502 | 7e-050 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q84JR6 Putative uncharacterized protein (Fragment) | 279 | 8e-023 |
| B9HE43 Predicted protein | 273 | 4e-022 |
| B9HE45 Predicted protein | 273 | 4e-022 |
| Q84JR5 Putative uncharacterized protein (Fragment) | 273 | 4e-022 |
| B9RPP7 DUF26 domain-containing protein 2, putative | 271 | 7e-022 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G21910.1 receptor-like protein kinase-related | 671 | 2e-070 |
| AT3G21900.1 receptor-like protein kinase-related | 514 | 3e-052 |
| AT4G20670.1 lipase | 476 | 6e-048 |
| AT3G21990.1 receptor-like protein kinase-related | 474 | 1e-047 |
| AT3G21960.1 LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, petal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902); BEST Arabidopsis thaliana protein match is: receptor-like protein kinase-related (TAIR:AT2G31620.1); Has 915 Blast hits to 891 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 915; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 474 | 1e-047 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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