RadishBase

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Information for unigene UN13406

FASTA Sequence

Unigene ID:UN13406

Length: 784

GGGAAAACGTAGAGATCGAGAGAGAGAGAGAGAAGAAGAAGAGAAGTTTGATCTTGTGAGAGAAGGAAGAGAACATGGCTGCTTCA
GTGATGCTTTCATCAGTGACATTGAAACCTGCGGGTTTCACGGTGGAGCCGACGGACGGAGGAACGAACGAATCGAACTCAAAAGC
TTTGCAGAGAGAGAGAGAGATCTTCGTTTAGATCCCCTGGAGGAATCGCGACAATGGCGGAAAAGGCAGTGACCATCAGAACCCGA
AAATTCATGACCAACAGACTTCTCTCAAGGAAGCAGTTCGTTATTGATGTTCTTCACCCTGGAAGAGCCAATGTTTCAAAGGCTGA
GCTGAAGGAGAAGCTAGCAAGGATGTACGAGGTCAAGGACCCAAACGCCATATTTGTTTTCAAATTCAGAACCCATTTTGGAGGTG
GTAAATCATCCGGGTTTGGTTTGATCTATGACAATGTCGAGAGCGCTAAGAAGTTTGAACCCAAGTACAGACTTATCAGGAATGGT
CTTGACACCAAGATCGAGAAATCAAGGAAACAAATTAAGGAAAGGAAGAACCGTGCTAAGAAGATCCGTGGTGTTAAGAAGACCAA
GGCTGGTGATCCCAAGAAGAAGTGAGAGATCACAAGCTAGTATCAGTCATTTTCTGTTCTTCATAATCGAACTTTTATGTTCATCT
TAAAGTTCTTTGTTTGCAATTAGATTTTCTCTGCAACTAAGACATCTAAACATAATCAAAGGTTTTTGTTCAATACTATATTTTAA
GCTCTTCTCC

Annotation(GO term)

GenBank top hits (Blast detail)	Score	E value
XP_002882383 40S ribosomal protein S24 [Arabidopsis lyrata subsp. lyrata]	668	6e-068
NP_187143 40S ribosomal protein S24-1 [Arabidopsis thaliana]	660	5e-067
XP_002874417 hypothetical protein ARALYDRAFT_910915 [Arabidopsis lyrata subsp. lyrata]	650	7e-066
NP_198158 40S ribosomal protein S24-2 [Arabidopsis thaliana]	641	7e-065
AAM63791 40S ribosomal protein S19-like [Arabidopsis thaliana]	641	7e-065

Swiss-Prot top hits (Blast detail)	Score	E value
Q9SS17 40S ribosomal protein S24-1	660	2e-068
Q8LC83 40S ribosomal protein S24-2	641	3e-066
Q962Q6 40S ribosomal protein S24	435	3e-042
Q56JU9 40S ribosomal protein S24	432	6e-042
Q5RAQ8 40S ribosomal protein S24	432	6e-042

TrEMBL top hits (Blast detail)	Score	E value
B7FMK4 40S ribosomal protein S24	621	1e-062
C6TAW2 40S ribosomal protein S24	621	1e-062
B9RWY8 40S ribosomal protein S24	619	2e-062
A9PC05 40S ribosomal protein S24	618	2e-062
B6SIX3 40S ribosomal protein S24	618	2e-062

Arabidopsis top hits (Blast detail)	Score	E value
AT3G04920.1 40S ribosomal protein S24 (RPS24A)	661	2e-069
AT5G28060.1 40S ribosomal protein S24 (RPS24B)	642	2e-067

EST library breakdown for ESTs in the assembly


12	6			26%


11	4			17%


6	5			22%


10	4			17%


7	2			9%


9	1			4%


19	1			4%

Unigene Members