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Information for unigene UN13426

FASTA Sequence
Unigene ID: UN13426Length: 1279  SNP
GGCCCGTCGTCTCTATTCTTCTTCAGCTTGCCGCTTCCACCGAACCAACGAGAGAGAAAGATCCGATCAAAAAAAGAGAATGGGTT
TCAAGAGGAAGAAGGGCGACGGCGACGGAGAGGAAATGGAAGCCGAAGATAACAGAAGACCCAGCTTCAACACGGCGGAGAGGAGG
AACGTGATACTGCCGTCGATGATAAAGAACAAAGACAAAAGAGCCAAAGTGTACGCGAAGCAGAAACACGAGAAGAAAGTCGAGAA
GCAGAAGAAGATCAAAGCTCGTGACGCCGCTGAGAAACAAGCTCTCGAGCTTGGCGAAGAGCCTCCACAGAAGATGGTTCCGAAGA
CGATTGAGAATACGAGAGAAGCTGATGAGACTGTTTGCAGACCTGATGATGAAGAATTGTTTGCGGATATCGATGCTGATGAGTTT
AATCCTGTCCTGAGACGTGAAGTTACTCCTAAGGTCTTGATCACTACATGTCGTTTCAATTCCACTAGAGGACCTGCGTTTATATC
GGAGTTACAGTCGGTGATCCCGAACTCTGATTATCGCAAGAGAGGAACTTATGATTTGAAGAAGATTGTAGAGTACGCAAAGAAGA
AGGATTATACATCTCTTATTGTAGTTCATACTAATCGCAGAGAGCCTGATGCGCTCCTTATCATTGGTTTGCCAAACGGTCCTACT
GCTCATTTCAAATTGTCAAATCTTGTTCTAAGGAAGGATATTAAGAATCATGGAAACCCTACAAGCCATGAACCGGAACTGATTTT
AAATAACTTCACAACTCGTCTAGGAAACCGTGTTGGGAGGTTTTTCCAGTCACTGTTTCCTCAAGAACCTAACTTCCGTGGTAGGA
GAGTTGTAACGTTCCATAACCAGCGTGACTTTATACTTTTCAGACATCATCGTTACATATTCGACGTAAAGGAAGACAAACAAAGT
GGTGCGAAAGGAAAAGATGGTGTTGCTAAAGAGAGAGTCAAGCCTCGTCTTCAGGAATGTGGTCCAAAATTCACGCTTAAGCTAGT
GACTTTGCAGCATGGAACCTTTGACACAAAAGGCGGAGAGTTTGAATGGGTTCATAAGCCTGAAATGGACACGAGCAGGAGGAGGT
TCTTCTTGTGATTGAATGCTGCTGTGTCTTCACCCCAAGTTTTGTGTTTATTTTCGTTTGTCGTTTTATAACCCAAACCAAAACTG
TAGCTTTTCCTTAAATCGTCTTCTAAAACTTCACATTTCTTCTCAATATAAGCCATCAAGATTCAACAATCGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002872885 hypothetical protein ARALYDRAFT_912074 [Arabidopsis lyrata subsp. lyrata]16412e-180
NP_567213 ribosomal RNA processing brix domain-containing protein [Arabidopsis thaliana]15669e-172
XP_002302686 predicted protein [Populus trichocarpa]13778e-150
CBI22317 unnamed protein product [Vitis vinifera]13401e-145
ACU22729 unknown [Glycine max]13392e-145

Swiss-Prot top hits (Blast detail)Scoree value
Q8AVP1 Ribosome production factor 16273e-064
Q7TND5 Ribosome production factor 15881e-059
Q5RJS9 Ribosome production factor 15825e-059
Q5R631 Ribosome production factor 15791e-058
Q9H9Y2 Ribosome production factor 15772e-058

TrEMBL top hits (Blast detail)Scoree value
Q9M125 AT4g01560/F11O4_615666e-172
O82589 F11O4.615102e-165
B9GRT3 Predicted protein13775e-150
C6TII9 Putative uncharacterized protein13391e-145
B9RMY3 U3 small nucleolar ribonucleoprotein protein imp4, putative13363e-145

Arabidopsis top hits (Blast detail)Scoree value
AT4G01560.1 MEE49 (maternal effect embryo arrest 49)15987e-178
AT1G63780.1 IMP43352e-031

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
109  53%
 
65  29%
 
72  12%
 
111  6%

Unigene MembersMember information