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Information for unigene UN13440

FASTA Sequence
Unigene ID: UN13440Length: 779 SSRSNP
GGGAGCCTCTGAATGTGCTTTGTTCTCTCTCTCTCTCTCTCTCCATCCGTTCATTTTATCTTCTCTCCTCCTTATCACTTGATCTT
TTTTCCTAATCTTTCGCTCATTTGTCGACAGCAAAACTTCTGACAATGGAAGCAATCAGATTCTCTAACGTGTCAGCTCTTCTTAT
ACTGCTGCTGCTACTGTCACTGTCTCTCCGTGCGACGTCAAAAGACCAAACTGTTTCTTGCACAATGTGTACCTCTTGCGACAATC
CATGTAACCCTGTCCCGTCTTCCTCTCCGCCCCCTACTCCTCCGAGCTCCGGCGGCGGCGGTGGATCTTATTATTATTCTCCTCCT
CCTCCTAATCATCCGAGCTCCGGCGGCGACGGCTCTTATTATTATCCTCCTCCTTCGAGTTCCGGTGGTGGTAAATACCCTCCTCC
GTATGGAGACGGTGGACAGAGTTACTATTATCCGCCTGCTTCTTACGGTAACTACCCGACGCCGCCTCCGCCGAATCCCATCGTTC
CTTATTTTCCGTTTTACTTTCACGTACCTCCTCCGGGAGATTCTGGATCGGATCGTTTAATGAGTTCATTTCTCTTTGTTCTGTTC
TCGTTCTTGATTTGTTTTGGGTGAATGATGAGAAGGATCATGTTTTACTACTACTTTTACCTTTTTAACTATGCTACTACTTTTTT
ACTTTCTGTTGACAATTTGTAATTAACATCATAATTACTCGTTGTTAAGAATCTAGATATGAGCAAAAAGTAAATTTATAACTTTT
TCTTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884607 hypothetical protein ARALYDRAFT_477990 [Arabidopsis lyrata subsp. lyrata]5825e-058
NP_568708 hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana]5592e-055
XP_002865724 hypothetical protein ARALYDRAFT_494989 [Arabidopsis lyrata subsp. lyrata]5476e-054
XP_002870180 predicted protein [Arabidopsis lyrata subsp. lyrata]4061e-037
NP_566291 hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana]4042e-037

Swiss-Prot top hits (Blast detail)Scoree value
O53426 Proline-rich antigen homolog1711e-011
P78621 Cytokinesis protein sepA1531e-009
Q9FLQ7 Formin-like protein 201441e-008
Q54SP2 Formin-B1441e-008
P41484 Proline-rich antigen1404e-008

TrEMBL top hits (Blast detail)Scoree value
Q9FJ12 At5g492805592e-055
Q9M7Y1 F3E22.11 protein4042e-037
O23462 At4g161403763e-034
B9RZK7 Nutrient reservoir, putative3387e-030
B9HX94 Predicted protein3262e-028

Arabidopsis top hits (Blast detail)Scoree value
AT3G06750.1 hydroxyproline-rich glycoprotein family protein5813e-060
AT5G49280.1 hydroxyproline-rich glycoprotein family protein5591e-057
AT4G16140.1 proline-rich family protein3762e-036
AT1G70985.1 hydroxyproline-rich glycoprotein family protein1906e-015
AT1G23050.1 hydroxyproline-rich glycoprotein family protein1638e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
94  20%
 
112  10%
 
77  35%
 
62  10%
 
105  25%

Unigene MembersMember information