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Information for unigene UN13447
| FASTA Sequence |
| Unigene ID: UN13447 | Length: 1313 |
| SNP | GGGGAGCCCCACTGAGCGATGCCCTCACAGCAACGGCTTCATTTCCCAAACTCTCTTCTCTTGTTTTGAGTGATCTAATCTTTTAC
GAAGATGGGTGTTTTTGTCTACTTATTATTGTCCTGAATTCACACGTCGAATCCAACGTGGCATCTCTCTCCACTGTATGCCAGCT
CACTCACACTCCCTCCCCTTTATAAATGTCCTCCTCTCTCACTCGTATCCTCCACTGAGTTTAGTGTGTGAGACTGTAGAGTAAAA
AAAAAGAGTCAAATAAAAAAACAAAATGGTGGGTATGGGTTTGTTCATGTGTATGTTGATGATGGTGTGTGTGATTTCCTGTGGTG
AAGCAGCTCCAGGAGCTAAGTTCGAGGATCTTTACCGTTCAAGTTGGGCTATGGATCATTGTGTCAACGACGGAGAAGTCACGAAA
CTCAAGCTTGACAATTTCTCTGGAGCTGGGTTCGAGTCGAGGAGCAAGTACTTGTTCGGTAAAGTCTCTATCCAGATTAAGCTCGT
GGAGGGTGATTCAGCAGGAACCGTCACTGCTTTCTACATGTCTTCAGAAGGTTCGAACCACAACGAGTTTGATTTCGAGTTCCTAG
GCAACACAACCGGCGAGCCTTACATAGTCCAAACAAACGTCTACGTGAACGGAGTTGGAAACAGAGAGCAAAGACTCAACCTTTGG
TTCGATCCCACCACTGAGTTCCACACTTACTCTATCCTCTGGAGTAAACGCAGTGTTGTGTTTATGGTGGATGAGACTCCTATTCG
TGTCCACAAGAACCTTGAAGATAAAGGCATCCCATTTGCTAAAGATCAAGCGATGGGAGTGTACAGCTCCATTTGGAATGCAGATG
ATTGGGCTACACAAGGAGGTCTTGTGAAAACAGATTGGACTCACGCTCCTTTCATTGCTTCTTACAAAGATTTCAAGATTGATGCT
TGTGAGGTTCCGACAACAACTGACCTAAGCAAGTGTAGTGGAGAAGATCAGAGATTCTGGTGGGATGAGCCGACTGTGTCTGAGCT
TAGCCTTCATCAGAATCATCAGCTTATTTGGGTTCGAGCTAACCATATGATCTATGACTATTGCTATGATGCTGCGAGGTTTCCTG
TTACTCCTCTTGAGTGCCAACACCATCGCCATTTGTAGTCCAAAGTTGATCTTCTGTTTAACTTGGGCAACAAGTTGTTGTTGTCA
AGAGTACATGTGGCTCCTTGATGATTCTGTTTATGTATAAATAATCAAATTATCTATTGATTTTGTTGAATTTAGTTTTGGTTTTA
AATAGAAAATGCGATATTTGTGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAV92081 xyloglucan endotransglycosylase/hydrolase [Brassica rapa subsp. campestris] | 1502 | 2e-164 |
| BAJ34011 unnamed protein product [Thellungiella halophila] | 1476 | 3e-161 |
| NP_192230 xyloglucan endotransglucosylase/hydrolase protein 9 [Arabidopsis thaliana] | 1452 | 2e-158 |
| AAM62971 putative xyloglucan endotransglycosylase [Arabidopsis thaliana] | 1437 | 9e-157 |
| XP_002874875 hypothetical protein ARALYDRAFT_490240 [Arabidopsis lyrata subsp. lyrata] | 1414 | 4e-154 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8LDW9 Xyloglucan endotransglucosylase/hydrolase protein 9 | 1452 | 7e-160 |
| Q9XIW1 Probable xyloglucan endotransglucosylase/hydrolase protein 5 | 775 | 2e-081 |
| Q39857 Probable xyloglucan endotransglucosylase/hydrolase (Fragment) | 766 | 2e-080 |
| Q41638 Xyloglucan endotransglucosylase/hydrolase protein A | 764 | 4e-080 |
| Q41542 Probable xyloglucan endotransglucosylase/hydrolase | 756 | 3e-079 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q5MD55 Xyloglucan endotransglycosylase/hydrolase | 1502 | 2e-164 |
| C0SVH2 Putative uncharacterized protein At4g03210 (Fragment) | 1452 | 1e-158 |
| B9S9N2 Xyloglucan endotransglucosylase/hydrolase protein 9, putative | 1172 | 3e-126 |
| C6TMP1 Putative uncharacterized protein | 1171 | 4e-126 |
| C0IRG2 Xyloglucan endotransglucosylase/hydrolase 3 | 1162 | 5e-125 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G03210.1 XTH9 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 9); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase | 1457 | 2e-161 |
| AT4G03210.2 XTH9 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 9); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase | 1216 | 1e-133 |
| AT5G13870.1 EXGT-A4 (ENDOXYLOGLUCAN TRANSFERASE A4); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase | 779 | 6e-083 |
| AT4G37800.1 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative | 750 | 1e-079 |
| AT5G65730.1 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative | 741 | 2e-078 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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