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Information for unigene UN13449
| FASTA Sequence |
| Unigene ID: UN13449 | Length: 1116 |
SSR | SNP | GGATTCTCCTGTAATTCCTTTCCACCAGGAGAAAACTAAGGAACCGATAACTCGCAAACCCATCAAAACAAAACAAAAAAATGCCA
TCAGGCAAACCTTCTTCTTCTGTCTTCTCATTACATCCCAAACCAACACCATTAAAACCTTCAAGCAGCACCAGCAACAACAACAA
CACCACAAACCAAGCATGCGCGGCTTGCAAATACCAACGTAGAAAATGTGCTCCTGATTGTCTTCTCGCTCCTTACTTCCCTCACG
ACCGTCACCGACAATTCCTCAACGCGCATAAGCTCTTTGGTGTAAGCAACATCACCAAGATCATCAAAGACCTTAGCCCTCCTGAT
AAAGACGCCGCTATGTATACAATCATGTTTCAATCCGATGCACGTGCCAATGATCCCATCGAAGGATGCTATAGCATCATTAGAAA
GCTTCAGTACCAGATCGAATACTCAAAAAACGAGTTGGAGATGGTTGTTCAGCAATTGGCTGTGTTCCGTAATCATCATCAAGAAC
CGCATATTCAGATTCAAGAACCTGAGGATCTCTCTAGTTTTTCGAGTTCTTGTGATCTAAACAACAACAACAACTCGATTCCTTAC
AGCTACCCTCTTCACCATGTCCAAGAACCAATTCAGCAGCAACAAGAACAACAACAATATTGTTCCTCTGGAAACTTTAACGGGTT
ACAAGAAGACATGTGGTGTCTTCAACTTCAAGATTCATCAACGACGGTGAATATGAAAGTTGGCTTCATTGATGAATGTGAGGACG
TTAAGCCTGTGGAAGAGGTTTCTAGTGAAACACACGAGTTCGAGCATCATCATGATGGTTTGGTTGAAGAACCATACATCATTTCT
TCTTAGCTTTTCCTTTTTCTTTTGGTCTGTTGGACTTTTATTATTTTCTTGATTTTAGAATCATTTTTCTAGGGCTAACAAAATCT
CCTTTCGCTGATCGATCTTAATAGTTATTTTTTAACCAAATTTATTTTCTTCTGGATTTTTTTTTTTGTATTTCATTTGGTAAAAT
TTGTATTAGATGTGAAAGAAACATGGAATCTTCAAGATAAATGTTAAACAAGAATTTGATGGAATAAAACACATTTTAATGACC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_188001 LOB domain-containing protein 22 [Arabidopsis thaliana] | 1109 | 7e-119 |
| XP_002882855 LOB domain family protein [Arabidopsis lyrata subsp. lyrata] | 1109 | 7e-119 |
| XP_002527399 LOB domain-containing protein, putative [Ricinus communis] | 596 | 2e-059 |
| XP_002275956 PREDICTED: similar to LBD22 (LOB DOMAIN-CONTAINING PROTEIN 22) [Vitis vinifera] | 468 | 2e-044 |
| XP_002327547 predicted protein [Populus trichocarpa] | 464 | 5e-044 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LRW1 LOB domain-containing protein 22 | 1109 | 3e-120 |
| Q9SSM9 LOB domain-containing protein 7 | 320 | 1e-028 |
| Q9STS6 LOB domain-containing protein 27 | 292 | 2e-025 |
| O04479 LOB domain-containing protein 6 | 278 | 7e-024 |
| Q9FML4 Protein LATERAL ORGAN BOUNDARIES | 268 | 1e-022 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SN30 LOB domain-containing protein, putative | 596 | 2e-059 |
| B9MWT1 Predicted protein | 464 | 3e-044 |
| B9N2X9 Predicted protein | 458 | 2e-043 |
| A2Q435 Putative uncharacterized protein | 379 | 2e-034 |
| B9R927 LOB domain-containing protein, putative | 345 | 2e-030 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G13850.1 LBD22 (LOB DOMAIN-CONTAINING PROTEIN 22) | 1110 | 2e-121 |
| AT1G72980.1 LBD7 (LOB DOMAIN-CONTAINING PROTEIN 7) | 320 | 9e-030 |
| AT3G47870.1 LBD27 (LOB DOMAIN-CONTAINING PROTEIN 27) | 292 | 2e-026 |
| AT1G65620.1 AS2 (ASYMMETRIC LEAVES 2); protein binding | 278 | 6e-025 |
| AT1G65620.2 AS2 (ASYMMETRIC LEAVES 2); protein binding | 278 | 6e-025 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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