|
Information for unigene UN13451
FASTA Sequence |
Unigene ID: UN13451 | Length: 920 |
| SNP | GGAATAAAAGTGAACCCTTTAGCTTAGACTGCTTCACTTCCATAGTCTCTTTTCTAGGGTTTTAAGGTTTCCGCACCGTTTCACGA
ATCCTCACTACACGTAATCATTCATCATGACTACCGAAGACAAAGAGATCCTCGCCGCCAAATTGGAAGAGCAGAAGATCGATCTT
GATAAGCCTGAAGTTGAGGACGTTGATGACAACGATGATGATGACTCCGAAGACGATGATAATGATGATGATGCAGAGGGACAAGA
GGGAGGCAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCGCAAAGCCATGCTCAAGCTTGGGATGAAACCTATCACTGGTGTCA
GCCGTGTCACTGTCAAAAAGAGCAAGAACATCATGTTCGTCATATCAAAACCTGATGTGTTCAAGAGCCCTGCATCGGACACGTAC
GTGATCTTTGGAGAGGCAAAGATCGAGGACTTGAGCTCTCAGCTCCAGTCCCAGGCTGCAGAGCAGTTCAAGGCTCCTGATATCAG
CAACGTGGTCTCGCAGGGTGAATCTTCCTCGAGTGCTGCTGCGGTGGTGCAAGATGATGATGAGGAGATTGACGAGGAGGGTGTTG
ACTCAAAGGACATTGAGTTGGTGATGACCCAAGCAGGAGTTCCTAGGCCAAGAGCCGTGAAGGCGCTTAAGGCTGCTGATGGGGAT
ATTGTCTCTGCCATCATGGAACTTACCACCTAAACCAAAATCTTTTCAACTTTAATGTGCGTGTGTCAGAGTGATTCAGAAATTTT
TGTTTTTCATGTTTCCTTGGAAGTGATTTTCAATGTTGTATCAGTAAAAAACCTCATAGATTATTGAATTTCAGTTTGATTTGGTT
TTGAATATTGGTAAGTGTTTGCGGTTACAGTTAAGGACTTTATGATACGTCTTTTGGTCC
|
|
|
GenBank top hits (Blast detail) | Score | e value |
XP_002871590 hypothetical protein ARALYDRAFT_909339 [Arabidopsis lyrata subsp. lyrata] | 854 | 2e-089 |
NP_187845 Nascent polypeptide-associated complex subunit alpha-like protein 1 [Arabidopsis thaliana] | 850 | 6e-089 |
NP_196889 Nascent polypeptide-associated complex subunit alpha-like protein 3 [Arabidopsis thaliana] | 840 | 8e-088 |
XP_002266597 PREDICTED: similar to nascent polypeptide associated complex alpha [Vitis vinifera] | 716 | 2e-073 |
ACU14783 unknown [Glycine max] | 697 | 3e-071 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9LHG9 Nascent polypeptide-associated complex subunit alpha-like protein 1 | 850 | 3e-090 |
Q6ICZ8 Nascent polypeptide-associated complex subunit alpha-like protein 3 | 840 | 4e-089 |
Q9M612 Nascent polypeptide-associated complex subunit alpha-like protein | 687 | 2e-071 |
Q94JX9 Nascent polypeptide-associated complex subunit alpha-like protein 2 | 644 | 2e-066 |
Q9SZY1 Nascent polypeptide-associated complex subunit alpha-like protein 4 | 614 | 6e-063 |
TrEMBL top hits (Blast detail) | Score | e value |
C6SZW0 Putative uncharacterized protein | 697 | 2e-071 |
A9P8T1 Putative uncharacterized protein | 696 | 3e-071 |
A2PYH3 Alpha chain of nascent polypeptide associated complex | 695 | 4e-071 |
A9NT74 Putative uncharacterized protein | 694 | 5e-071 |
Q8RUI4 Os01g0938900 protein | 687 | 3e-070 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT3G12390.1 nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative | 865 | 4e-093 |
AT5G13850.1 NACA3 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3) | 841 | 3e-090 |
AT3G49470.1 NACA2 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 2) | 645 | 1e-067 |
AT4G10480.2 nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative | 620 | 1e-064 |
AT4G10480.1 nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative | 615 | 4e-064 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|