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Information for unigene UN13487

FASTA Sequence
Unigene ID: UN13487Length: 1889 SSR 
CGTTAATAAACGGTGTGATACCAATAAACTCTTCAAACGTCGAAATTCTTCATACTGAAAAAAGCTTACGGAATATGTTACAGATG
ACAACGGTCCAATTCAACACAAAAGCACTCTTACACAAAAACATAGACTGTAAAAACTCTTTAAAACTTCAAACTTATCAACCAAA
CAAAACCCACTGACTTCTTGACAAAAGCTATTACTCAGTTAGGACTGAAGAACTTAAGCTTAAGTCCTTGAGTAACCATGCTCCAT
ATCCCACCTATGGAGAACGCCAGGCTGAATGCAACTCCTAACCAACCCAATCCCCAATGGAAATACCAATTGAAACTGTACTTGGC
CGGTTTCTTGATCAAAACCCACATGAAGCAAGGATAAGCAAACGTGACCGGAAGGGTGAGTCCACCGAGCAAACCCGCGAGACTGG
ACAGGAAAGGGAGTGCCACGCCGATGAAAAAGGAGACAAAACCGAAAAAGACTCTAAAACCTGATCTGACCCAAATTGAACACGGC
TTGTTGGTTCGGCTTGTGTAGCCAGCCTCAAAGCTGTCAAAGGCGGGCATAGAGTATATCTGAAAGCTGCTCAAGCAACTGAAGAC
TACTAGGAGAAATGCCGTCGCTAATAAACCTCGAGGAATGTCGTGAATGTGGAATGCATAAAGAGCAGCGAGCATACCTCCTGAAG
GCATAAGGTTCCCATAAGCCCAAAAACCTCCGATGGAGATTGGAAAGATACACAGAGCAATGAAGAAGTAAGAAACTTTGGCTCCT
CTCCACATTGGTACATGAGCGGATGCTTAAACGTTGATGGCATCGTCGACTGAATTTCAAGAACCAAGTTGTGACCTCTGAAGGCA
AAAGCTACAATACCAAGAGCATTCAACACAGAAAAAAGCGAACCAGAAAGCGAAGGCATAGCGAGTGGCTCGTAGGAAATAGTGGC
TGGTCTTGGTTGACTAACAGAGAGAACCCAAACCATTGTAGAGTAAGTTATCGCAGTCACTGCTCCTATTAAGGAGAGTCCCGCGA
TGGAATTGAGGTTTGGAAGTTGAGACAGAACGATGCATAGAGAAGTAAACACCAGATACCACTCCACTGTTGTTAAAGGGTTCGAG
GTGCATAATGGACCACAAACTATTTGGAAGAAGAGTTTCATTGTCTCTCCACCGATCAGAATAAGAGCTGTCGCAGTTCCTGCTGA
TAAGTAAACCGTAGGAAACAATGCAAGCCAAACTCCCAATCTTTCTCCAAAGGCAGCTTGTGCAAGCTCGACATATCGGTTGTAAC
GTTTGCCTGGGACAGCTTCGTGTAACTGAACTAGAATCCACAGTGTGTAGAGTTGCCAAATATAGGCTATTGTCAGTGACAGAATT
CCCCAACTCCAGCCAAGAAACGTAAACGCAACGGGAAGAACGAGGGCTTGAAACCCAACACCAGCGTTTAGGTTATGAAACGCGGC
ATAGTGAGCGTTTCCGTTACGAGACTCAGTGATAGGAAGCCAAGCGTCTTGTGGGTTGAGCTTAGTGAGATGGCCCACTTCCTCTA
GATATCCTTTCATGTTGACAAGAACACGTTTCATAGGAGTTCCGATGGGACTCAAGAACCTCGGCGATATGAAGGAAGTAGGAGTC
CATGCCGCCGACGAGGATTTAGTTGCGGGGCGAGGAGATCTTTGACCGGACGGAGTTAGAATCTCTGGAGTGGATACTCGCGGCGT
CGCTGGCATTGATATTAGCTCTGTCTCGGGTCTCTCGTCCATCGTTCTATATCTCTATCTGAGCAGGTGGAAAAAGATGGTTTTTG
TTTTGCTTTTTCTTTCTCACTATCACTCTTTTTTTATTATCAAATTTTCTCACTATCACTCTCTCTCTCTCACTCTAGTTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_175198 Lysine histidine transporter-like 8 [Arabidopsis thaliana]16422e-180
XP_002894065 amino acid transporter family protein [Arabidopsis lyrata subsp. lyrata]16422e-180
BAA82706 amino acid transporter-like protein 1 [Arabidopsis thaliana]16379e-180
XP_002327101 lysine/histidine transporter [Populus trichocarpa]15786e-173
XP_002510286 amino acid transporter, putative [Ricinus communis]15705e-172

Swiss-Prot top hits (Blast detail)Scoree value
Q9SX98 Lysine histidine transporter-like 816421e-181
Q84WE9 Lysine histidine transporter-like 76185e-063
Q9LRB5 Lysine histidine transporter 25352e-053
Q9SR44 Lysine histidine transporter-like 25253e-052
Q9FKS8 Lysine histidine transporter 15102e-050

TrEMBL top hits (Blast detail)Scoree value
B9MVJ1 Lysine/histidine transporter15784e-173
B9R7J3 Amino acid transporter, putative15704e-172
A5AT49 Putative uncharacterized protein15524e-170
B8BPP2 Putative uncharacterized protein11771e-126
Q2QQS3 LILLIM08, putative, expressed11717e-126

Arabidopsis top hits (Blast detail)Scoree value
AT1G47670.1 amino acid transporter family protein16428e-183
AT4G35180.1 LHT7 (Lys/His transporter 7); amino acid transmembrane transporter6185e-064
AT1G24400.1 LHT2 (LYSINE HISTIDINE TRANSPORTER 2); acidic amino acid transmembrane transporter/ amino acid transmembrane transporter/ neutral amino acid transmembrane transporter5352e-054
AT1G67640.1 lysine and histidine specific transporter, putative5253e-053
AT5G40780.1 LHT1; amino acid transmembrane transporter5102e-051

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
94  57%
 
102  29%
 
61  14%

Unigene MembersMember information