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Information for unigene UN13504

FASTA Sequence
Unigene ID: UN13504Length: 749 SSRSNP
GGACACCAAAACCCTAATCTCTCAAATCTTCTTCTCCAAACACCAAAAGAAAAAAAATGGTTAACCCTAAAGTTTTCTTCGACATG
AGCGTCGGCGACAAACCCGCCGGCCGCATCGTGATGGAGCTTTACGCCGACACAACCCCCGAGACCGCCGAGAATTTCCGCGCCCT
CTGCACCGGCGAGAAGGGAGTCGGCAAATCCGGAAAGCCGCTCCACTACAAGGGCTCGGCCTTCCACCGCGTGATCCCGAAGTTCA
TGTGCCAGGGAGGAGATTTCACCGCCGGGAACGGGACCGGAGGAGAGTCGATCTACGGCATGAAGTTCAAGGACGAGAACTTCGTC
AAGAAACACACCGGTCCGGGCATCCTGTCCATGGCCAACGCTGGTCCGAACACGAACGGATCTCAGTTTTTCATCTGCACTGAGAA
GACGTCGTGGCTCGATGGGAAGCACGTTGTGTTCGGTCAGGTTGTCGAAGGGATGGATGTCGTTAGGAACATTGAGAAGGTTGGAT
CTGACAGTGGAAGGACCTCGAAGAAGGTTGTGATCGCTGACTGTGGTCAGCTTTAGATCTGGTGAGAGAAAAGTGAGAGAGAGAGA
GGAGGTTGATCCAATGGTAGCTTTGTGTCTTTTCTGTTGTGTTTTTTTCTTTTGTTCCCGTTCTTCTCTTCTTCGTTTGGATCTTT
GTGTTTCTGTGGCTACCATTGAATAATAATGATAATGATTAATCTTAGTTATTAATGCTCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
P24525 RecName: Full=Peptidyl-prolyl cis-trans isomerase; Short=PPIase; AltName: Full=Cyclophilin; AltName: Full=Cyclosporin A-binding protein; AltName: Full=Rotamase8631e-090
AAA62706 cyclophilin [Brassica napus]8487e-089
AAR27291 cyclophilin [Eutrema halophilum]8487e-089
XP_002884009 hypothetical protein ARALYDRAFT_899976 [Arabidopsis lyrata subsp. lyrata]8452e-088
NP_179251 Peptidyl-prolyl cis-trans isomerase CYP19-1 [Arabidopsis thaliana]8362e-087

Swiss-Prot top hits (Blast detail)Scoree value
P24525 Peptidyl-prolyl cis-trans isomerase8636e-092
Q38900 Peptidyl-prolyl cis-trans isomerase CYP19-18368e-089
Q39613 Peptidyl-prolyl cis-trans isomerase8116e-086
Q8W171 Peptidyl-prolyl cis-trans isomerase 18027e-085
P21568 Peptidyl-prolyl cis-trans isomerase7938e-084

TrEMBL top hits (Blast detail)Scoree value
Q6TMX3 Peptidyl-prolyl cis-trans isomerase8485e-089
Q96416 Peptidyl-prolyl cis-trans isomerase8181e-085
D0ELH5 Peptidyl-prolyl cis-trans isomerase8135e-085
Q52UN0 Peptidyl-prolyl cis-trans isomerase8127e-085
D6PAY2 Cyclophilin8119e-085

Arabidopsis top hits (Blast detail)Scoree value
AT2G16600.1 ROC3; peptidyl-prolyl cis-trans isomerase8367e-090
AT4G34870.1 ROC5 (ROTAMASE CYCLOPHILIN 5); peptidyl-prolyl cis-trans isomerase7722e-082
AT2G21130.1 peptidyl-prolyl cis-trans isomerase / cyclophilin (CYP2) / rotamase7632e-081
AT4G38740.1 ROC1 (ROTAMASE CYP 1); peptidyl-prolyl cis-trans isomerase7596e-081
AT3G56070.1 ROC2 (ROTAMASE CYCLOPHILIN 2); cyclosporin A binding / peptidyl-prolyl cis-trans isomerase7328e-078

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
94  40%
 
193  30%
 
181  10%
 
81  10%
 
121  10%

Unigene MembersMember information