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Information for unigene UN13517
| FASTA Sequence |
| Unigene ID: UN13517 | Length: 994 |
| SNP | GTATAAAGAACCAAACAAAGGTATAATGGTTTTATGGTATATTATTATAACTTCTTTTGTTTTTCTTAAAAATCTTATTTCGTGAA
AACTGAAAATAAAATGACTTTCATTATAATTAGTTTTTTCTTAGACTATTACTTGGTTTAGAGTCTTGAGGGCATTCCTCCAGCGA
CGACCAAAGTTTCACCGGTGATGTAAGAAGAATCATCAGATGCTAAGAAAGCTGCAGCAGCAGCCATGTCTCCTGTTGTTCCCAAC
CTGTTAAGCAGAGTCTTCTCTTCGATGCTCTCCCTCACTTGGGAGTTTCCGGTGATGAAAGAAGCAAAGTGTGTGGGCACAAAACC
GGGAGCAACCGCGTTGACACGTGTGTCCGGACCCATCTCAGCAGCAAGAGCCTTGGTTAGTCCGAGAAGAGCAGTCTTAGTGACAC
CATACATAGCCATGGAACCTTGTGGTTGAAATCCAGCGATGGAAGTAATGAAGATAACAGAAGAACCCTTCTCTAAGTGAGGAGCC
ATATCCTGAAGGAGAAGTATAGAGGATTTGACATTGATTTCCCAAAGCTTGTCGAGGACAGCTTCTTTGGTGGACAAGATCGGGTC
CGTAGATGGATTAGCAGCGGCGTTACAGACAACGATATCTATCTTTCCATATTTCTGAACAGTTTTTTCGACAAGATCTCGGCGAT
GTTGAGCATTGGAAACATGACAGACGATTCCATAAGCATCAATCCCTTTTGATTTGAGTTTTTCTACTGCTTCCTCAACATTTGCC
TGCTTGCGGGAAGAAACGACGACGGAAGCGCCTTCGAGACCGAAACGCTCGATGATACCGAAGCCGATCCCTTGCGTCGAGGCCGT
TACTATCGCCACCTTTCCTTCCAATCTCCTCCCTATCTTCTTCCCCTCCATTTCTCTCTCTCTTTTCTTTTCTTTTTTTTGCTTCT
TTCTCTCTCTTAGCCGATGATGATTGATGAATGATGAGTGTGATGCCC
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002874790 short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] | 1199 | 2e-129 |
| NP_567300 dehydrogenase/reductase SDR family member 4 [Arabidopsis thaliana] | 1189 | 3e-128 |
| XP_002264497 PREDICTED: hypothetical protein [Vitis vinifera] | 1032 | 5e-110 |
| ABZ02330 short chain alcohol dehydrogenase [Arabidopsis halleri] | 1030 | 9e-110 |
| ABZ02331 short chain alcohol dehydrogenase [Arabidopsis halleri] | 1027 | 2e-109 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9BTZ2 Dehydrogenase/reductase SDR family member 4 | 569 | 1e-057 |
| Q5RCF8 Dehydrogenase/reductase SDR family member 4 | 567 | 2e-057 |
| Q8WNV7 Dehydrogenase/reductase SDR family member 4 | 543 | 1e-054 |
| Q99LB2 Dehydrogenase/reductase SDR family member 4 | 542 | 2e-054 |
| Q9GKX2 Dehydrogenase/reductase SDR family member 4 | 542 | 2e-054 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9S9W2 AT4g05530 protein | 1189 | 2e-128 |
| B1P4A6 Short chain alcohol dehydrogenase (Fragment) | 1030 | 6e-110 |
| B1P4A7 Short chain alcohol dehydrogenase (Fragment) | 1027 | 1e-109 |
| B1P4C8 Short chain alcohol dehydrogenase (Fragment) | 1025 | 2e-109 |
| B1P4C5 Short chain alcohol dehydrogenase (Fragment) | 1019 | 1e-108 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G05530.1 IBR1 (INDOLE-3-BUTYRIC ACID RESPONSE 1); binding / catalytic/ oxidoreductase | 1190 | 1e-130 |
| AT2G29150.1 tropinone reductase, putative / tropine dehydrogenase, putative | 320 | 7e-030 |
| AT2G29260.1 tropinone reductase, putative / tropine dehydrogenase, putative | 316 | 2e-029 |
| AT5G06060.1 tropinone reductase, putative / tropine dehydrogenase, putative | 310 | 1e-028 |
| AT2G29370.1 tropinone reductase, putative / tropine dehydrogenase, putative | 299 | 2e-027 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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